Syntrophobacter fumaroxidans: Sfum_4057
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Entry
Sfum_4057 CDS
T00418
Name
(GenBank) Radical SAM domain protein
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
sfu
Syntrophobacter fumaroxidans
Brite
KEGG Orthology (KO) [BR:
sfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfu03009
]
Sfum_4057
Enzymes [BR:
sfu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
Sfum_4057
Ribosome biogenesis [BR:
sfu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Sfum_4057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
RlmN_N
Fer4_12
Radical_SAM_2
Motif
Other DBs
NCBI-ProteinID:
ABK19723
UniProt:
A0LQM1
LinkDB
All DBs
Position
complement(4924997..4926025)
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AA seq
342 aa
AA seq
DB search
MEPVCVKDFTLPELEEWVQGIGERSFRARQLFRHVYGRGVRSWSECSDLSRMFRVQLEHG
VELDALSVLKKEQADDGTSKYLFGLRDGHSIEAVLIPDLPRSTLCVSSQVGCALGCKFCL
TGSLGFKRNLSAAEIVDQVCQVQRDLGSRSRITNIVFMGMGEPLANLDSVLRAIRVIAEP
NGMAFSHRRITLSTAGLVPQLRRLGRESPVNLAVSLHAAENELRAELMPVNRTYPLEVLM
AACREYPLPPRKRITFEYILLDGINDDPKQAKQLVKLLHGIRAKVNLMPFNPHPGSVFRK
PSEQRVLAFQEALQNARITTHVRRSRGGEIGAACGQLVAEYG
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggaaccggtttgcgtcaaagatttcacgcttcccgagcttgaagagtgggttcagggc
atcggggagcgttcttttcgggctcggcagctgtttcgccacgtctacgggcgtggcgtt
cgcagttggagcgaatgcagcgatttgagcaggatgttccgcgttcaactggaacacggc
gtggagctggacgccctgagtgtcctcaagaaagaacaggccgacgacggcacgtcgaaa
tacctgttcggcctgcgcgacggtcattccatcgaagccgtactgattcccgaccttccc
cgctcgaccttgtgcgtttcgagccaggtagggtgcgccctggggtgcaagttctgcctc
accgggtccctggggttcaagcgaaacctctccgcggccgagatcgtcgaccaggtgtgc
caggtgcagcgcgacctcgggtcccgatcgcgcatcaccaacattgtgttcatgggcatg
ggagaacctctggccaatttagattcggtcctgagagcgatacgcgtcatcgcggagccc
aacggaatggcgttttctcaccgcaggatcacgctttccacggccgggttggttccacag
ctgcgccggctggggcgggagtcccccgtgaacctggcggtcagcctccacgccgccgag
aatgaactgcgcgccgagctcatgcccgtcaaccggacctatccattggaagtgctgatg
gccgcttgtcgcgagtacccgctcccgccgcgcaagcgaatcaccttcgagtacatcctg
ctggacggaatcaacgacgatccgaagcaggccaagcaactggtgaagctgctccacggc
atacgggccaaggtgaacctcatgcctttcaatccacacccgggctcggtttttcgaaaa
ccttccgaacagcgcgttttggcttttcaggaagcgcttcaaaacgcacggatcaccacc
cacgtccggcgcagccggggcggcgaaatcggcgccgcctgcggtcagctcgtggcggaa
tacggatag
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integrated database retrieval system
