Streptomyces fungicidicus: CNQ36_03285
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Entry
CNQ36_03285 CDS
T07133
Name
(GenBank) endonuclease VIII
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sfug
Streptomyces fungicidicus
Pathway
sfug03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CNQ36_03285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfug03400
]
CNQ36_03285
Enzymes [BR:
sfug01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CNQ36_03285
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CNQ36_03285
DNA repair and recombination proteins [BR:
sfug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CNQ36_03285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Zn_ribbon_RRN7
Zn_ribbon_8
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
AYL34536
UniProt:
A0A494UQ43
LinkDB
All DBs
Position
complement(763760..764623)
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AA seq
287 aa
AA seq
DB search
MPELPEVEALRDFLSEHLVGHEIVRVLPVAISVLKTYDPPLTALEGREVIAVHRYGKFLG
LETDGGPYFVTHLARAGWLQWKDRLPSGPPRPGRGPLALRVALETGAGFDLTEAGTQKRL
AVYVVADPAEVPGVARLGPDPLAGDFDERRLAELLSGERRRLKGALRDQGLIAGVGNAYS
DEILHAARMSPFKLAASLTPEETTRLYEALRGTLTEAVERSRGVAAGRLKAEKKSGLRVH
GRTGEPCPVCGDTVREVSFSDSSLQYCPTCQTGGKPLADRRLSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgcccgaggtcgaggcgctcagggacttcctctccgagcacctcgtcggc
cacgagatcgtgcgcgtgctgcccgtggcgatcagcgtcctgaagacctacgacccgccg
ctcacggccctggagggccgcgaggtcatcgccgtgcaccggtacggcaagttcctcggc
ctggagacggacggcggaccgtacttcgtcacccatctggcccgcgccggctggctgcag
tggaaggaccgcctgcccagcggcccgccccgccccggcaggggcccgctcgccctgcgg
gtggcgctggagaccggcgccggcttcgacctcacggaggccggcacccagaagcggctc
gcggtgtacgtggtggcggacccggcggaggtgccgggcgtcgcccggctcggccccgac
ccgctggccggtgacttcgacgagcggcggctggcggagctcctctccggcgaacgccgc
cggctcaagggcgcgctgcgggaccagggcctgatcgcgggcgtcgggaacgcctacagc
gacgagatcctgcacgcggcccgcatgtccccgttcaaactggccgcctccctcaccccg
gaggagaccacccggctgtacgaggcgctgcgcggcaccctcaccgaggcggtggagcgc
tcccgcggggtcgcggccgggcggctcaaggcggagaagaagagcggcctcagggtccac
ggccgtaccggtgagccctgcccggtgtgcggggacaccgtccgcgaggtctccttcagc
gactcctcgctgcagtactgcccgacctgccagacgggcggcaagccgctggccgaccgg
aggctctcccggctgctgaagtga
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