Streptomyces fungicidicus: CNQ36_08155
Help
Entry
CNQ36_08155 CDS
T07133
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sfug
Streptomyces fungicidicus
Pathway
sfug00040
Pentose and glucuronate interconversions
sfug01100
Metabolic pathways
sfug02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sfug00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CNQ36_08155
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CNQ36_08155
Enzymes [BR:
sfug01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CNQ36_08155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Fil_haemagg_2
Motif
Other DBs
NCBI-ProteinID:
AYL35405
UniProt:
A0A494UPD3
LinkDB
All DBs
Position
complement(1812745..1814079)
Genome browser
AA seq
444 aa
AA seq
DB search
MSTFRWHGHAITRAASLAGCTALVLALTGTGAQAHSPSHHPRDAARQTLGAHDGWASYGT
GTTGGAAADADHVHTVRTWAEFKAALADGGDAPKIIKVKGTIDAVSEGCEAFAAPGYDFD
AYLEAYAPETWGLEQDLSAEPDDSPEGLRRTSAAAQDTAIKANIPSNTTIIGVGRNAGIK
GASLQIKGVDNVIVRNLALESPIDCFPQWDPTDGSQGNWNSEYDTAVVYGSTHVWLDHNT
FTDGEHPDSEAPTYFGMLYQQHDGELDIVRGADYVTASWNVFSEHDKTILIGNSDSESTA
VGDRGRLKTTFHHNLFTGLVERAPRVRFGQVDVYNNHFVAETGYSYSFGVGKESQLVAEH
NAFTLPKGISPAKIIKRWNDSPLTAEHNLVNGRRVDLIAVHNAEIPAETVRSGAGWTPTL
RAAVHPAAAVPALVKHGAGAGRVR
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgttcagatggcatgggcatgccattacgcgagccgcctcgctggccggctgc
accgccctcgtgctggccctgaccggcaccggcgcccaggcccactccccgtcgcaccac
ccccgggacgccgcccggcagacgctcggcgcccacgacggctgggcctcctacggcacc
ggcaccaccggaggcgccgccgccgacgccgaccacgtccacaccgtgcgcacctgggcc
gagttcaaggcggccctcgcggacggcggcgacgctccgaagatcatcaaggtgaagggc
accatcgacgccgtctccgagggctgcgaggcgttcgccgcgcccggctacgacttcgac
gcctacctggaggcgtacgcgccggagacctggggcctggagcaggacctgagcgccgag
cccgacgacagcccggagggcctgcgcaggacctccgccgccgcccaggacacggccatc
aaggcgaacatcccctccaacaccacgatcatcggtgtcggccggaacgccggcatcaag
ggcgccagcctgcagatcaagggcgtggacaacgtcatcgtccgcaacctcgccctggag
agcccgatcgactgcttcccgcagtgggaccccaccgacggcagccagggcaactggaac
tccgagtacgacaccgccgtcgtgtacggctccacccacgtctggctggaccacaacacc
ttcaccgacggcgagcaccccgacagcgaggcccccacctacttcgggatgctctaccag
cagcacgacggcgagctggacatcgtccggggcgccgactacgtcaccgcctcctggaac
gtcttctccgagcacgacaagacgatcctcatcggcaacagcgacagcgagtccaccgcc
gtcggcgaccgggggaggctgaagacgaccttccaccacaacctcttcaccggcctggtc
gaacgcgccccgcgcgtccgcttcgggcaggtggacgtctacaacaaccacttcgtggcg
gagaccggctactcctacagcttcggtgtcggcaaggagtctcagctcgtcgccgagcac
aacgcgttcacgctgccgaagggcatcagccccgccaagatcatcaagcggtggaacgac
tcgccgctcaccgccgagcacaacctggtcaacggcaggcgcgtcgacctgatcgccgtg
cacaacgcggagatcccggcggagaccgtgcggtccggcgccggctggacccccaccctg
cgcgccgcggtccacccggccgcggccgtcccggccctggtgaagcacggcgcgggcgcc
ggccgcgtccgctga
DBGET
integrated database retrieval system