Streptomyces fungicidicus: CNQ36_12420
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Entry
CNQ36_12420 CDS
T07133
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sfug
Streptomyces fungicidicus
Pathway
sfug03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CNQ36_12420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfug03400
]
CNQ36_12420
Enzymes [BR:
sfug01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CNQ36_12420
DNA repair and recombination proteins [BR:
sfug03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CNQ36_12420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
Helicase_RecD
PIF1
AAA_16
PhoH
NPHP3_N
TraI_hel_assoc_N
nSTAND3
DEAD
AAA
TrwB_AAD_bind
HTH_IclR
ABC_tran
UvrD_C
SLFN-g3_helicase
ATPase_2
DUF87
Motif
Other DBs
NCBI-ProteinID:
AYL36170
UniProt:
A0A494UNS4
LinkDB
All DBs
Position
complement(2780654..2782924)
Genome browser
AA seq
756 aa
AA seq
DB search
MATQSAGDTPGERRLAILEGVLERITYSNEENGYTVARVDTGRGAGDLLTVVGALLGAQV
GESLRMEGRWGSHPQYGKQFHVENYTTVLPATVQGIRRYLGSGLVKGIGPVFADRITQHF
GVDTLTIIEEEPKRLIEVPGLGPKRTRKIADAWEEQKAIKEVMLFLQTVEVSTSIAVRIY
KKYGDASISVVKNQPYRLAADVWGIGFLTADRIAQSVGIPHDSPDRVKAGLQYALSQATD
QGHCYLPEEKLIADAVKLLQVDTGLVIECLAELAAEPEDGEDPGVVRERVPDPEGGDPVT
AVYLVPFHRAELALSAQLLRLLRTDEDRMPAFRDVAWDKALGWLRGRTGTDLAPEQEAAV
RLALTEKVAVLTGGPGCGKSFTVRSIVELARAKKAKVVLAAPTGRAAKRLAELTGAEAST
VHRLLELRPGGDAAYDRDRPLDADLVVVDEASMLDLLLANKLVKAVPPGAHLLFVGDVDQ
LPSVGAGEVLRDLLADGGPVPAVRLTRVFRQAQQSGVVTNAHRINAGQHPVTDGMKDFFL
FVEDDTEETGRLTVDVAARRIPAKFGLDPRRDVQVLAPMHRGPAGAGTLNGLLQQAVTPG
RPDLAEKRFGGRVFRVGDKVTQIRNNYEKGENGVFNGTVGVVTSLDPVDQRLTVLTDEDE
EVPYDFDELDELAHAYAVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKQLVV
LVGSRKAIGQAVRTVSAGRRCTALDFRLAGARLSNG
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggccacccagtccgcgggcgacacccccggcgagcgccggctcgccatcctcgaaggc
gtcctggaacgcatcacgtactccaacgaggagaacggctacaccgtcgccagggtcgac
accggcagaggcgccggtgacctcctcaccgtcgtcggcgcgctgctcggtgcgcaggtg
ggggagtcgctgcggatggaggggcgctgggggtcgcacccgcagtacggcaagcagttc
cacgtggagaactacacgaccgtgctgccggccacggtgcagggcatccgccgttacctg
ggctcgggcctggtcaaggggatcggcccggtcttcgccgaccgcatcacccagcacttc
ggcgtcgacacgctcaccatcatcgaggaggagcccaagcggctcatcgaggttcccggg
ctcgggcccaagcggaccaggaagatcgccgacgcctgggaggagcagaaggcgatcaag
gaggtcatgctcttcctccagaccgtcgaggtctccacctccatcgccgtgcgcatctac
aagaagtacggcgacgcctcgatctccgtggtcaagaaccagccgtaccggctcgccgcc
gacgtctggggcatcggcttcctcaccgccgacaggatcgcccagtccgtcggcatcccg
cacgacagcccggaccgggtcaaggcgggactgcagtacgcgctgtcgcaggccaccgac
caggggcactgctatctccccgaggagaagctgatcgccgacgccgtgaagctcctccag
gtggacaccggcctcgtcatcgagtgcctcgccgagctggccgccgagccggaggacggc
gaggaccccggtgtcgtgcgcgagagggtgccggacccggagggcggtgaccccgtcacc
gccgtctacctggtccccttccaccgcgccgaactcgccctctccgcccagctgctgcgg
ctcctgcgcaccgacgaggaccggatgccggccttccgggacgtcgcctgggacaaggcc
ctcggctggctgaggggccgtaccggcaccgacctcgcccccgagcaggaggccgccgtc
aggctggcgctgaccgagaaggtcgccgtcctcaccggcggacccggctgcggcaagtcc
ttcaccgtccggtcgatcgtggagctggcccgcgccaagaaggccaaggtcgtcctggcc
gccccgaccggccgcgccgccaagcggctcgccgagctgaccggcgcggaggcctccacc
gtccaccggctgctggagctcaggcccggcggcgacgcggcctacgaccgggaccgtccg
ctcgacgccgacctggtcgtggtcgacgaggcgtccatgctggacctgctcctcgcgaac
aagctggtcaaggccgtcccgccgggcgcccacctgctcttcgtcggggacgtcgaccag
ctgcccagcgtcggcgcgggggaggtgctgcgggacctgctcgcggacggcggtcccgtc
cccgccgtccggctcacccgggtcttccgccaggcccagcagtccggcgtggtgaccaac
gcgcaccggatcaacgccgggcagcaccccgtcacggacggcatgaaggacttcttcctc
ttcgtcgaggacgacaccgaggagaccggccggctcaccgtcgacgtcgcggcccgccgc
atcccggcgaagttcggcctcgacccccgccgggacgtgcaggtcctcgcccccatgcac
cgcggcccggccggcgcgggcacgctcaacgggctgctccagcaggccgtcacccccggc
cgccccgacctcgccgagaagcggttcggcggccgggtcttccgcgtcggcgacaaggtg
acccagattcgcaacaattacgagaagggggagaacggggtcttcaacggcaccgtgggc
gtggtcacctcgctcgacccggtcgaccagcgcctgacggtgctgaccgacgaggacgag
gaggtgccgtacgacttcgacgagctggacgaactggcgcacgcctacgccgtgaccatc
caccgctcccagggcagcgagtacccggcggtcgtcatcccggtcaccaccggcgcctgg
atgatgctccagcgcaacctgctctacacggcggtcacccgggccaagcagctggtcgtc
ctcgtcgggtcccgcaaggcgatcggacaggcggtgcgcacggtctccgcgggccgccgg
tgcacggcactggacttccggctcgccggagcccgcctctcgaacgggtga
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