Streptomyces fungicidicus: CNQ36_19275
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Entry
CNQ36_19275 CDS
T07133
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sfug
Streptomyces fungicidicus
Brite
KEGG Orthology (KO) [BR:
sfug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfug03032
]
CNQ36_19275
03400 DNA repair and recombination proteins [BR:
sfug03400
]
CNQ36_19275
Enzymes [BR:
sfug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CNQ36_19275
DNA replication proteins [BR:
sfug03032
]
Prokaryotic type
DNA Topoisomerases
CNQ36_19275
DNA repair and recombination proteins [BR:
sfug03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CNQ36_19275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AYL37361
UniProt:
A0A494V2Z1
LinkDB
All DBs
Position
4227043..4229871
Genome browser
AA seq
942 aa
AA seq
DB search
MSPTSETAKGGRRLVIVESPAKAKTIKGYLGPGYIVEASVGHIRDLPNGAAEVPEKYTGE
VRRLGVDVEHDFQPIYVVNADKRAQVKKLKDLLKESDELFLATDEDREGEAIAWHLQEVL
KPKIPVKRMVFHEITKDAIREAVANPRQLNQKLVDAQETRRILDRLYGYEVSPVLWKKVM
PRLSAGRVQSVATRLVVERERERIAFRSAEYWDLTGTFATGRAGDASDPSSLVARLQSVD
GRRIAQGRDFDSLGQLKGANTLHLDEANARALAAALENTRFAVRSVESKPYRRSPYAPFR
TTTLQQEASRKLGFGAKATMQVAQKLYENGYITYMRTDSTTLSETAVAAARAQVTQLYGA
DYLPPQPRTYAGKVKNAQEAHEAIRPSGDRFRTPAGTGLTGDQFKLYELIWKRTVASQMK
DATGNSVTVKIGGTAADGRDVEFSASGKTITFHGFLKAYVEGADDPNAELDDRERRLPQV
AEGDALSAEEITVDGHATKPPARYTEASLVKELEEREIGRPSTYASIIGTILDRGYVFKK
GTALVPSFLSFAVVNLLEKHFGRLVDYDFTARMEDDLDRIARGEARAVPWLKRFYFGEGT
GNGDAAEAGNGDGDHLGGLKELVTDLGAIDAREVSSFPVDNGIVLRVGRYGPYIERGEKD
TEQHQRADIPTDLAPDELTVEFAEELLAKPSGDFELGTDPSTGHEIVAKDGRYGPYVTEV
LPEGTPKTGKNAVKPRTASLFKSMSLDTVTLDDALKLMSLPRVVGTDAEGQEITAQNGRY
GPYLKKGTDSRSLQAEEQLFTITLEEALAIYAQPKQRGRAAAKPPLKELGTDPVSEKPVV
VKDGRFGPYVTDGETNATLRSGDSVEEITPERGFELLAEKRAKGPAKKTAKKTAAKKAPA
KKTAAKKTAAKKTTAAKKTTAKKTTAKTAAAKKAAASNASED
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccgaccagcgagaccgcgaagggcggccgccgactcgtcatcgtcgagtcgcct
gccaaggcgaagacgatcaagggctacctcggccctggctacatcgtcgaggcgagcgtc
gggcacattcgtgatcttcccaacggcgccgccgaggtgccggagaagtacaccggtgag
gtccgccgcctcggcgtggacgtcgaacacgacttccagccgatctatgtggtcaacgcg
gacaagcgggcccaggtcaagaagctcaaggacctgctcaaggagtccgacgaactcttc
ctcgccaccgatgaggaccgcgagggcgaggccatcgcctggcacctgcaggaagtgctc
aagccgaagatcccggtcaagcggatggtcttccacgagatcaccaaggacgcgatccgc
gaggccgtggccaacccgcgccagctcaaccagaagctggtcgacgcccaggagacccgc
cgcatcctcgaccgcctctacggctacgaggtctcgccggtcctgtggaagaaggtcatg
ccccggctgtccgccggccgcgtgcagtccgtcgccacccggctggtggtggagcgggaa
cgggagcgcatcgcgttccgttccgccgagtactgggacctgacgggcaccttcgcgacc
ggccgggccggtgacgcctccgacccgtcgtcgctggtcgcccggttgcagagcgtcgac
ggccggcgcatcgcgcagggccgcgacttcgactccctcgggcagctgaagggcgcgaac
accctccacctcgacgaggcgaacgcccgcgcgcttgccgccgccctggagaacacgcgg
ttcgccgtgcgttccgtcgagtccaagccgtaccgccgctcgccgtacgccccgttccgt
acgacgacgctgcagcaggaggcgagccgcaagctcggcttcggcgcgaaggccaccatg
caggtggcccagaagctgtacgagaacggctacatcacttacatgcgtacggactcgacg
accctgagcgagacggcggtcgccgccgcccgcgcccaggtgacgcagctgtacggcgcc
gactacctgccgccccagccccgcacctacgcgggcaaggtcaagaacgcgcaggaggcg
cacgaggcgatccgtccctcgggggaccgtttccgcacgcccgccgggaccgggctgacc
ggtgaccagttcaagctgtacgagctgatctggaagcggaccgtcgcctcgcagatgaag
gacgccaccgggaactccgtcaccgtgaagatcggcggcacggcggccgacggccgggac
gtcgagttcagcgcgtccggcaagacgatcaccttccacggcttcctgaaggcctacgtc
gagggcgccgacgacccgaacgccgagctcgacgaccgtgagcgccggctgccgcaggtc
gccgagggcgacgcgctgtcggccgaggagatcacggtcgacgggcacgccaccaagccc
ccggcccgctacaccgaggcgtcgctggtcaaggagctggaggagcgggagatcgggcgc
ccgtcgacgtacgcgtcgatcatcggcacgatcctcgaccgcggctacgtgttcaagaag
ggcacggccctggtgccgtccttcctctccttcgccgtggtcaacctgctggagaagcac
ttcggccggctcgtcgactacgacttcaccgcgaggatggaggacgacctcgaccgcatc
gcgcggggcgaggcccgtgccgtgccgtggctgaagcggttctacttcggtgaggggacc
ggcaacggcgacgcggccgaggcgggcaacggcgacggggaccacctcggcggcctcaag
gaactggtgaccgacctgggcgcgatcgacgcccgcgaggtgtcgtcgttccccgtggac
aacggcatcgtgctgcgggtcgggcgctacggcccgtacatcgaacgcggcgagaaggac
accgagcagcaccagcgcgccgacatccccacggacctggcgcccgacgagctgaccgtc
gagttcgccgaggaactgctcgccaagccgagcggcgacttcgagctgggcaccgacccg
tcgaccggccacgagatcgtcgccaaggacggccgctacggcccgtacgtcacggaggtc
ctccccgagggcacgccgaagaccggcaagaacgcggtcaagccgcgcactgcctcgctc
ttcaagtcgatgtccctggacacggtcaccctggacgacgcgctgaagctgatgtcgctg
ccgcgggtggtcggcacagacgccgagggccaggagatcaccgcgcagaatggccgctac
gggccgtatctgaagaagggcaccgactcgcggtccctgcaggccgaggagcagctcttc
acgatcacgctggaggaggcgctggcgatctacgcccagcccaagcagcgtggccgggcg
gcggccaagccgccgctgaaggagctgggcaccgacccggtgagcgagaagccggtcgtg
gtgaaggacggccgcttcggcccgtacgtcaccgacggggagaccaacgcgacgctgcgc
tccggcgacagcgtcgaggagatcaccccggagcgcggcttcgagctgctcgccgagaag
cgggccaagggccccgccaagaagaccgcgaagaagacggcggccaagaaggcgccggcg
aagaagacggccgccaagaagaccgcggcgaagaagaccacggccgcgaagaagaccacc
gcgaagaagacgacggcgaagacggccgccgccaagaaggcggccgcctccaacgcgtcg
gaggactga
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