Streptomyces fungicidicus: CNQ36_23485
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Entry
CNQ36_23485 CDS
T07133
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sfug
Streptomyces fungicidicus
Pathway
sfug03420
Nucleotide excision repair
sfug03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sfug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CNQ36_23485
03430 Mismatch repair
CNQ36_23485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfug03400
]
CNQ36_23485
Enzymes [BR:
sfug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CNQ36_23485
DNA repair and recombination proteins [BR:
sfug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CNQ36_23485
MMR (mismatch excision repair)
Other MMR factors
CNQ36_23485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AYL38103
UniProt:
A0A494UT85
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All DBs
Position
5132836..5136324
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AA seq
1162 aa
AA seq
DB search
MPARITDPDQLKELLGIPFTPEQTACITAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRKALVRAGVTDPDAIDPDNPPGEPVISTYHAFAGRLL
TDHGLRVGLEPTSRLLADATRYQLAARVLREAPGLYPALTRSFPDLVGDLLTLDAELAEH
LVRPEDLRDHDAELLRTLENTRLTNADLRKVPEAAAARRELADLVLRYRAAKRERDLLDF
GDQIALSARLAALPEVGRVLRDEFRVVLLDEYQDTSVAQRVLLAGLFGGGTGHPVTAVGD
PCQAIYGWRGASVANLDDFPEHFAHADGRTATRQSLSENRRSGGRLLDLANGLAEPLRAM
HAGVEALRPAPGAERDGTVRCALLATHAEEIDWIADSIAHLVNTGKAPGEIAVLCRTAGD
FAEIQGALVARDVPVEVVGLSGLLHLPEIADLVAVCEVLQDPGANASLVRLLTGPRWRIG
PRDLALLGRRARRLVTHARVDGDDDPDRRLAEAVEGVDPAEVISLADALDTFLETPMDGR
RDDDGLPFSPDARVRFARLATELRDLRRSLADPLMDVLHRVLAVTGLEVELSASPHALAA
RRRETLSNFLDVAASFAAGDGEATLLAFLGFLRTAAQYEKGLDNALPGGENTVKVLTAHK
SKGLEWDVVAVPGLVTGTFPSGQGREKWTAQGKVLPHALRGDADTLPDVDSWDSRGLKAF
HEAMKEHQHTEELRLGYVTFTRPRSLLLGSGHWWGPSQKKPRGPSAFLHALYRHCAAGYG
EIEAWADEPAEDEENPALHRATDDQVWPLALDDAALARRRAAADTVLAHLDRLATRSDGP
AAAVHDPDAQDHPDWPPPPDDEDLPEEDPFADADPGDWDSWVTDRPAVPHQASAPEAAPR
PRTPEREPVPPPRPRLTPEEARAVASWDRDLDALAGELLRTRESVTEVLLPASLTASQLL
RLAADPDGFAQELARPMPRPPQPAARRGTRFHAWVEARFEELTLPMLDPDELPGSDAEIE
DERDLEALKEAFERTEYAHRTPHRVETPFQLSIADRVVRGRIDAVYTKQDGDGTTYEIVD
WKTSRGRTADPLQLAVYRLAWAEQQGIPLESVTAAFLYVRTGEVVRPGALPGRPELERLL
LGEPPGGTPGEIPHSEDTGAGR
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgctcgtatcaccgatcccgatcagctcaaggagctcctcggcatccccttcacc
ccggagcagacggcctgcatcaccgcgccgcccgccccgcaggtgatcgtggccggagcc
ggatcgggcaagacgacggtgatggcggcgcgcgtggtgtggctggtgggcaccggccag
gtcgcccccgaacaggtgctcggcctcaccttcaccaacaaggccgcgggcgagctcgcc
gaacgcgtccgcaaggcactggtcagggccggcgtcaccgacccggacgccatcgacccg
gacaaccccccgggcgagccggtgatctcgacctaccacgccttcgcgggccgcctgctg
accgaccacggactgcgcgtcggcctcgaaccgacctcccggctgctcgccgacgccacc
cgctaccagctcgccgcgcgcgtgctgcgcgaggcccccggcctctacccggcgctcacc
cgctccttccccgacctggtcggcgacctcctcaccctcgacgccgagctcgccgaacac
ctggtacgccccgaggacctgcgcgaccacgacgccgagctgctgcgcaccctggagaac
accaggctcaccaacgccgacctgcgcaaggtccccgaggcggccgcggcccgccgcgaa
ctggccgacctggtgctgcgctaccgggccgccaaacgcgaacgggacctgctcgacttc
ggcgaccagatcgccctgtccgcccggctcgccgccctccccgaggtcggccgagtgctg
cgcgacgagttccgcgtggtcctcctcgacgagtaccaggacacctcggtcgcccagcgc
gtcctgctcgccggactcttcggcggcggcaccggccacccggtgaccgcggtcggcgac
ccctgccaggcgatctacggctggcgcggcgcctccgtcgccaacctcgacgacttcccc
gagcacttcgcccacgccgacggccgcaccgccacccgccagtcgctcagcgagaaccgc
cgcagcggcggccgcctgctggacctcgccaacgggctcgccgagccactgcgcgccatg
cacgcgggcgtggaggcgctccgcccggccccgggcgccgaacgcgacggcaccgtgcgc
tgcgccctgctggccacccacgccgaggagatcgactggatcgccgactccatcgcccac
ctcgtgaacaccggcaaggcacccggcgagatcgccgtgctgtgccgcacggccggcgac
ttcgccgagatccagggcgccctggtcgccagggacgtccccgtcgaggtggtcggcctg
tccgggctgctgcacctgcccgagatcgccgatctcgtcgccgtctgcgaggtcctccag
gaccccggggccaacgcctccctggtacggctgctgaccggcccgcgctggcgcatcggc
ccccgcgacctcgccctgctgggccggcgggcccggcggctcgtcacccacgcgcgcgtg
gacggcgacgacgaccccgaccggcggctcgccgaagccgtcgagggagtcgacccggcc
gaggtgatctcgctcgccgacgccctcgacaccttcctcgagaccccgatggacggccgc
cgggacgacgacgggctgcccttctcaccggacgcgcgcgtgcgcttcgcccgcctggcc
accgaactgcgcgacctgcgccgctccctcgccgaccccctcatggacgtgctgcaccgc
gtcctggccgtcaccggcctggaggtcgagctgtccgcctcgccgcacgccctggccgcc
cgccggcgcgagaccctgtccaacttcctcgacgtcgccgcctccttcgccgccggcgac
ggcgaggccaccctgctcgccttcctcggcttcctgcgcaccgccgcccagtacgagaag
ggcctcgacaacgccctgcccggcggcgagaacaccgtcaaggtgctcaccgcccacaag
tccaagggcctcgaatgggacgtcgtcgccgtccccggactggtcaccggcaccttcccc
agcggccagggccgcgagaagtggaccgcgcagggcaaggtgctgccgcacgcgctgcgc
ggcgacgccgacaccctgcccgacgtcgactcctgggactcccggggcctgaaggccttc
cacgaggccatgaaggagcaccagcacaccgaggaactccgcctcggctacgtcaccttc
acccgcccccgctccctgctgctcggctccggccactggtggggacccagccagaagaag
ccgcgcggaccctccgcgttcctccacgccctgtaccggcactgcgccgccgggtacggc
gagatcgaggcatgggcggacgagcccgccgaggacgaggagaacccggcccttcaccgg
gccaccgacgaccaggtgtggcccctggccctggacgacgccgcccttgcccgccgccgc
gcggccgccgacacggtcctcgcccacctcgaccgcctcgccacccgctccgacggcccc
gccgcggccgtgcacgaccccgacgcccaggaccatccggactggccgccaccgcccgat
gacgaggacctccccgaggaggaccccttcgcggacgccgatccgggcgactgggactcc
tgggtcaccgaccgtcccgccgtcccgcaccaggcgtcggccccggaagccgccccgcgc
ccccgcacgccggagcgggagccggtgcccccgccgcgcccccggctcacccccgaagag
gcccgcgccgtcgcctcctgggaccgcgacctcgacgccctcgccggagagctgctgcgc
acccgcgagagcgtcaccgaggtcctgctgcccgcctcgctgaccgcctcccagctgctg
cgcctggccgccgacccggacggcttcgcccaggagctggcccgccccatgccccgcccg
ccgcagcccgccgcacgccgcggcacccgtttccacgcctgggtcgaggcacgcttcgag
gaactgaccctgcccatgctcgacccggacgagctgcccggcagcgacgccgagatcgaa
gacgaacgcgacctggaggccctcaaggaggccttcgaacgcaccgagtacgcccaccgc
accccgcaccgcgtggagacgcccttccagctgtcgatcgccgaccgcgttgtccgcggc
cgcatcgacgccgtctacaccaagcaggacggtgacgggacgacgtacgagatcgtcgac
tggaagaccagccggggccgcaccgccgacccgctccagctcgccgtctaccggctcgcc
tgggccgaacagcaggggatccccctggagagcgtcacggccgcgttcctgtacgtgcgc
accggcgaggtggtccgccccggcgcactgcccggccgtcccgaactggaacggctgctg
ctcggagagccgcccggcgggacgcccggtgagataccgcactccgaggacaccggcgcg
ggccgatag
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