Streptomyces fungicidicus: CNQ36_23770
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Entry
CNQ36_23770 CDS
T07133
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03090
RNA polymerase sigma-B factor
Organism
sfug
Streptomyces fungicidicus
Brite
KEGG Orthology (KO) [BR:
sfug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfug03021
]
CNQ36_23770
Transcription machinery [BR:
sfug03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CNQ36_23770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
DUF7343
Sigma70_ECF
HTH_24
MarR_2
NirdL-like_HTH
MarR
IF2_N
HTH_3
HTH_Crp_2
HTH_AraC
GerE
Motif
Other DBs
NCBI-ProteinID:
AYL38155
UniProt:
A0A494UX86
LinkDB
All DBs
Position
complement(5193288..5194448)
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AA seq
386 aa
AA seq
DB search
MRSEDGPVRDDERGTREMPAERVPDGIDGIPEQARPHPEDDSAEAGPPGGGQPGGAVRSA
PPAGPAGGAPGHGGAPAPAKPATGDEASARGRATGGTMSEHERHAEDETPRAPAARGARS
TPGAPAGQGGHAHHDPRDRSGARALFLELRTLQDGTPEYAELRNRLVRMHLPLVEHLARR
FRNRGEPLDDLTQVATIGLIKSVDRFDPDRGVEFSTYATPTVVGEIKRHFRDKGWAVRVP
RRLQELRLALTTATAELSQLHGRSPTVHELAEKLAISEEEVLEGLESANAYSTLSLDVPD
TDDESPAVADTLGAEDEALEGVEYRESLKPLLEDLPPREKRILLLRFFGNMTQSQIAQEV
GISQMHVSRLLARTLAQLREKLLVEE
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
gtgaggagcgaggacgggccggtgcgggacgacgaacgcggcacacgggagatgccggcc
gagcgcgtgccggacggcatcgacggcatccccgagcaggcccggccgcatccggaggac
gactccgcggaggcgggcccgccgggcggcgggcagcccggcggcgccgtgcggagcgcg
cccccggccggaccggccgggggcgctccgggccatgggggcgcccccgccccggcgaag
ccggcgaccggggacgaggcgagcgctcggggaagggcgacgggcgggacgatgagcgag
cacgagcgacacgccgaggacgagacgccgcgggcgcccgccgcccggggcgcgcggagc
acccccggcgcaccggccggccagggcgggcacgcgcaccacgacccgcgggaccgcagt
ggggcacgcgccctgttcctcgagctgcgcacgctgcaggacggcactcccgagtacgcg
gagctgcgcaaccgcctggtgcgcatgcacctcccgctcgtcgagcatctcgcgcgccgc
ttccgcaaccgcggcgagccgctggacgacctcacccaggtcgccaccatcgggctgatc
aagtcggtcgaccgcttcgacccggaccggggcgtggagttctcgacctacgccaccccg
acggtcgtcggtgagatcaagcggcacttccgcgacaagggctgggcggtgcgggtgccg
cgccggctccaggagctgcggctggcgctcaccacggccacggcggagctctcccagctg
cacggccgctcccccacggtgcacgagctggccgagaagctggccatctcggaggaggag
gtcctggagggcctcgagtccgcgaacgcgtactcgacgctgtccctggacgtccccgac
accgacgacgagtccccggcggtcgccgacaccctcggcgccgaggacgaggcgctggag
ggcgtggagtaccgggagtcgctcaagccgctgctggaggacctgccgccgcgcgagaag
cggatcctgctgctgcgcttcttcggcaacatgacccagtcgcagatcgcgcaggaggtc
ggcatctcgcagatgcacgtctcccggctgctggcccgcaccctggcccagctgcgggag
aagctgctcgtggaggagtga
DBGET
integrated database retrieval system