Streptomyces fungicidicus: CNQ36_25535
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Entry
CNQ36_25535 CDS
T07133
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sfug
Streptomyces fungicidicus
Brite
KEGG Orthology (KO) [BR:
sfug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfug03016
]
CNQ36_25535
Enzymes [BR:
sfug01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CNQ36_25535
Transfer RNA biogenesis [BR:
sfug03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CNQ36_25535
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AYL38470
UniProt:
Q06Z12
LinkDB
All DBs
Position
complement(5623324..5624616)
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AA seq
430 aa
AA seq
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MTDAHDTAADSSLRTTGGAPPDDGGSSVTEAPTPLLEPREGIPPVIADEAALAEAVAAFA
AGSGPVAVDAERASGYRYGQRAYLVQLRREGAGTALIDPVACPDLSALGEALSGVEWVLH
AATQDLPCLREIGMVPSRLFDTELAGRLAGFPRVGLGAMVENVLGFVLEKGHSAVDWSTR
PLPEPWLRYAALDVELLVDLRDALEKELDRQGKLDWARQEFDAIASAPPPEPRKDPWRRT
SGMHKVRRRRQMAVVRELWETRDRIARRRDVSPGKVLSDAAIVEAALALPANLHAMAALN
GFGQRVGRRQLEQWQAAVDRAKALSEAQLPQPGQPVTGPPPPRAWADKDPVAAARLSAAR
AGVAELAERLNMPPENLITPDTVRRVCWEPPGPDERSVAAALTAHGARAWQVDQVTPVLV
AALATSSPPA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccacgacaccgcagcagacagttcactgcgcaccaccggaggcgctcct
ccggacgacggcggatcttctgttacggaggcgccgacccccttgctggaaccccgcgag
ggcattccgcccgtgatagcggacgaggccgccctcgccgaggcggtcgccgccttcgcg
gccggcagcggacccgtcgccgtggacgccgagcgcgcctccgggtaccgctacggccag
cgcgcctacctcgtccagctgcgccgcgagggtgcgggtaccgcgctgatcgaccccgtg
gcctgccccgacctgtccgccctcggcgaggcgctgtccggcgtcgagtgggtgctgcac
gccgccacccaggacctgccctgtctgcgcgagataggcatggtgccctcccgcctcttc
gacaccgagctggccggccgccttgccgggttcccccgcgtcgggctcggcgcgatggtc
gagaacgtgctcggcttcgtcctggagaagggccactccgccgtcgactggtccacccgt
ccgctgcccgagccctggctgcggtacgccgccctcgacgtcgaactgctggtcgatctg
cgggacgccctggagaaggagctggaccgccagggcaagctggactgggcccggcaggag
ttcgacgcgatcgcctcggccccgccgccggagccccgcaaggacccctggcgccgcacc
tccggcatgcacaaggtgcgccggcgccgccagatggcggtggtgcgggagctgtgggag
acccgcgaccggatcgcccggcgccgtgacgtctcccccggcaaggtgctttccgacgcg
gcgatcgtggaggccgcgctcgcgctgcccgccaacctgcacgccatggccgcgctcaac
gggttcgggcagcgggtggggcggcgccagctggagcagtggcaggcggccgtcgaccgc
gcgaaggcgctgagcgaggcccagctgccgcagcccggccagccggtgaccggccctccg
ccgccgcgcgcctgggcggacaaggaccccgttgccgcggcccggctgtcggcggcccgc
gcgggggtcgccgaactcgccgagcggctgaacatgccgccggagaacctgatcaccccg
gacacggtgcgcagggtctgctgggagccgccggggcccgacgagcggtccgtcgccgcg
gcgctgacggcgcacggggcacgcgcgtggcaggtcgaccaggtcactcccgtgctggtg
gccgcgctggctacttcgtcgccccccgcatga
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