Streptomyces fungicidicus: CNQ36_27120
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Entry
CNQ36_27120 CDS
T07133
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sfug
Streptomyces fungicidicus
Pathway
sfug03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CNQ36_27120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfug03000
]
CNQ36_27120
03400 DNA repair and recombination proteins [BR:
sfug03400
]
CNQ36_27120
Enzymes [BR:
sfug01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CNQ36_27120
Transcription factors [BR:
sfug03000
]
Prokaryotic type
Helix-turn-helix
AraC family
CNQ36_27120
DNA repair and recombination proteins [BR:
sfug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CNQ36_27120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
DUF6233
Motif
Other DBs
NCBI-ProteinID:
AYL39713
UniProt:
A0A494UXP4
LinkDB
All DBs
Position
6023467..6024987
Genome browser
AA seq
506 aa
AA seq
DB search
MHTDTERCVRAVRSKDARFDGWFFTAVLTTGIYCRPSCPVVPPKPANMVFHPSAAACQQA
GFRACKRCRPDTSPGSPEWNHRADLVARAMRLIADGVVDREGVPGLAARLGYSTRQIERQ
LLAELGAGPLALARAQRAQTARLLIETTRLPMAEIAFAAGFASVRTFNDTVREVFALSPS
DLRTRAPRDASHATPGALSLRLPFRAPLNPDNLFGHLAATAVPGVEEWLPHSPNGVGGTP
SGAYRRTLRLPYGHGIVALTPRPDHIACRLTLGDPRDLTVAISRCRRLLDLDADPVAVDG
QLRADPVLAPLVDKAPGRRVPRTVDEAEFAVRAVLGQQVSTAAARTHAARLVTAHGTPLD
DPEGGLTHLFPSPEALAAVDPETLALPRTRRTTFTTLVSRLAGGELHLGADSDWPGTRAR
LLALPGFGPWTADVIAMRALGDPDAFLPTDLGIRRAARELGLPSTPAALTARAAGWRPWR
AYAVQYLWATDSHPINFLPAQATKEP
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccgacaccgagcgctgcgtgcgcgccgtgcggtccaaggacgcgcggttcgac
ggctggttcttcaccgccgtcctcaccaccggaatctactgccggcccagctgccccgtc
gtcccgcccaagccggcgaacatggtcttccacccgagcgcggcggcctgccagcaggcc
gggttccgggcctgcaaacggtgccggcccgacaccagccccggctcaccggagtggaac
caccgcgccgacctggtggcccgcgccatgcggctgatcgccgacggcgtcgtggaccgc
gagggcgtgcccgggctcgccgcccggctcggctacagcacccggcagatcgaacgccag
ctgctcgccgagctgggcgccggccccctcgcgctcgcccgcgcccagcgcgcccagacc
gcccggctgctcatcgagacgacccggctgccgatggcggagatcgccttcgcggccggc
ttcgcctccgtccgcaccttcaacgacaccgtccgcgaggtcttcgcgctctccccgagc
gacctgcgcacccgggcgccgcgggacgcctcccacgccacccccggcgcgctctccctc
cgcctgccgttccgcgccccgctcaaccccgacaacctcttcggccacctcgccgccacc
gccgtacccggcgtggaggagtggctcccccacagccccaacggcgtgggaggtaccccc
agcggcgcctaccggcgcaccctgcggctgccgtacgggcacggcatcgtcgccctcacc
ccgcgccccgaccacatcgcctgccgtctcaccctcggcgacccccgcgacctcaccgtc
gccatcagccgctgccgccgcctgctcgacctcgacgccgacccggtcgccgtcgacggc
cagctgcgcgcggacccggtcctcgcgcccctggtcgacaaggcgcccggccgccgcgtg
ccccgcaccgtcgacgaggccgagttcgccgtccgggccgtcctcggccagcaggtctcc
accgccgccgcccgcacccacgccgcccgcctggtcaccgcgcacggcacgcccctcgac
gaccccgagggcggcctcacccacctcttcccgtcccccgaggcactggccgccgtcgac
cccgagaccctggccctgccccgcacccgccgcaccaccttcaccaccctggtgagccgg
ctcgccgggggcgaactccacctgggggccgacagcgactggcccgggacccgcgcccgg
ctcctcgccctccccggcttcggcccctggacggccgacgtcatcgccatgcgcgccctc
ggcgaccccgacgccttcctccccaccgacctcggcatccgccgcgccgcccgcgaactg
ggcctgccctccaccccggccgccctcaccgcgcgcgcggccggctggcggccctggcgg
gcgtacgcggtccagtacctgtgggcgacggacagccacccgatcaacttccttccggcg
caagcgaccaaggaaccgtga
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