Streptomyces fungicidicus: CNQ36_28725
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Entry
CNQ36_28725 CDS
T07133
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sfug
Streptomyces fungicidicus
Brite
KEGG Orthology (KO) [BR:
sfug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfug03009
]
CNQ36_28725 (rimO)
Enzymes [BR:
sfug01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CNQ36_28725 (rimO)
Ribosome biogenesis [BR:
sfug03009
]
Prokaryotic type
ribosomal protein modification factors
CNQ36_28725 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
AYL39036
UniProt:
A0A494V2L8
LinkDB
All DBs
Position
6399730..6401205
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AA seq
491 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLEADGWQLVEDAEEADVAVVNTCGFVEAAKKDS
VDALLEANDLKGQGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYADISDRLQTIL
NGGIHASHTPRDRRKLLPISPAERQDSAADVALPGHGPVDLPEGLAPASGPRAPLRRRLD
GSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLNETRWLAEQGVKEVMLVSENNT
SYGKDLGDIRLLESLLPELAEVDGIERVRVSYLQPAEMRPGLIDVLTSTPKVVPYFDLSF
QHSAPDVLRAMRRFGDTDRFLELLDTIRSKAPQAGVRSNFIVGFPGESAADLAELERFLN
HARLDAVGVFGYSDEEGTEAATYDGKLDEDVVAERLARVSRLAEELVSQRAEERVGETVH
VLVESVDEEEGVHGRAAHQAPETDGQVLLTSGEGLSIGRMVEAKVIGTEGVDLVAEPLFQ
GSPACTEEAGR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacgccgtaccgtcgcactcgtcacccttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgtttggaggcggacggctggcagctcgtggaggacgccgag
gaagcggacgtcgccgtcgtcaacacctgcggcttcgtcgaagccgccaagaaggactcc
gtcgacgccctcctggaggccaacgacctcaagggacagggaagaacgcaggccgtcgtg
gcggtcggctgcatggccgagcggtacggcaaggaactcgccgaggccctccccgaggcc
gacggcgtgctcggcttcgacgactacgccgacatctccgaccgcctccagaccatcctg
aacggcggcatccacgcctcgcacaccccgcgcgaccggcgcaagctgctcccgatcagc
ccggccgagcggcaggactccgccgccgacgtggcgctccccggacacggcccggtggac
ctgccggagggcctcgccccggcgtccggcccccgggcacccctgcgccgccggctggac
ggctccccggtggcatcggtgaagctcgcctccggctgcgaccggcgctgctccttctgc
gccatcccctccttccgcggctccttcatctcccgccggcccagcgacgtgctgaacgag
acgcgctggctggccgagcagggcgtgaaggaggtcatgctggtctccgagaacaacacc
tcctacggcaaggacctcggcgacatccgcctgctggagtccctgctgcccgagctcgcg
gaggtcgacggcatcgagcgggtgcgggtcagctacctccagccggccgagatgcggccc
ggtctgatcgacgtgctgacctccaccccgaaggtcgtgccctacttcgacctgtccttc
cagcactccgcgcccgacgtgctgcgcgcgatgcgccgcttcggcgacaccgaccggttc
ctggagctgctcgacaccatccggagcaaggcgccccaggccggtgtccgctccaacttc
atcgtcggcttccccggcgagtccgccgccgacctcgccgagctggagcggttcctgaac
cacgcgcgcctggacgccgtcggcgtcttcggctactccgacgaggagggcaccgaggcg
gcgacgtacgacgggaagctcgacgaggacgtcgtcgccgaacggctggcccgtgtctcg
cggctggccgaggaactcgtctcgcagcgcgccgaggagcgggtcggcgagaccgtgcac
gtgctggtggagtccgtcgacgaggaagagggcgtccacggccgggcggcgcaccaggca
cccgagaccgacggccaggtgctgctcacgagcggcgaggggctgagcatcggccgtatg
gtcgaggcgaaggtgatcggcacggaaggtgtcgacctggtggccgagccgctgttccag
ggttcgcccgcgtgtactgaggaggcgggcagatga
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