Sorex fumeus (smoky shrew): 130015881
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Entry
130015881 CDS
T10594
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04550
Signaling pathways regulating pluripotency of stem cells
Brite
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130015881 (SMARCAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130015881
NCBI-ProteinID:
XP_055962596
LinkDB
All DBs
Position
Unknown
AA seq
1019 aa
AA seq
DB search
MSLFNLDRFRFEKRSKLEGSPEAAPPAAPPGPSSPISLSAEEENDEGSRPGTPDSDVTEK
TEDSSVPETPENERKASVSYFRNQRGIQCIDLSSDTEDAVSPNCSRALPKKDLSRDTVII
VSEPSEDEGSPGPPAVAGGNEDDISELEDIKDAKLQTLKELFPQRSDADLLKLIESTSTM
DGAIAAALLMFGDAEGGGPRKRKLSSSPERYVEDDFSDEQCVKKKKLDHEEEPSESAESS
GSWEQQERIVLKLQKEFPNFDKQELREVLKEHEWMYTEALESLKVFAEDQDTQYSAQSEF
PNGKEASSRSQSYPKPASKKLKQKCSLKPQNGFNKKRKKHVLNPKRVVEDSEYDSGSEAG
SSLDEDYSSGEEVVGDGYQGKILHFLQDASVGELTLIPQCSQKKAQKITELRPFNSWESL
FTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISNRLTKQVTMLTGSGGGWNTEQ
PSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGNKGP
HLIVVPASTIDNWLREVKLWCPALKVLCYYGSQEERKQIRYNIHSKYEEYNVIVTTYNCA
ISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINASNRLLLTGTPVQNNLLEL
MSLLNFVMPHMFSSSTGEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFILRRVKEEV
LKQLPPKKDRIELCAMSEKQEQLYLSLFNRMKKSINNLEKNTEMCNVMMQLRKMANHPLL
HRQYYTPEKLREMAQLMLKEPTHREANPDLIFEDMEVMTDFELNVLCKQYRHINNFQLDM
DLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQIS
ERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVG
QTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTADEGDEGSVPADIATLLRTSMGL
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcttcaacctggaccgcttccgcttcgagaaacggagcaagctcgaggggtcc
cccgaggccgcgcccccggccgccccgcccggcccctcctcgcccatttccctcagcgct
gaggaggagaacgacgaggggagccggcccgggacccccgactccgacgtcaccgagaaa
acagaagattcgagtgttccagaaaccccagaaaatgaaaggaaggcgagtgtgtcctat
ttcaggaatcagaggggaattcagtgcatcgacctgtcctccgacacggaggatgccgtg
tccccaaactgctcccgggccctcccgaagaaggacctcagcagggacaccgtgatcatc
gtctcggaaccgtctgaagacgaggggtccccagggccccctgcggtggcgggcggcaac
gaggacgatatttcagaactggaagacataaaggacgccaagctgcagaccctgaaggag
cttttcccacagcgaagcgatgccgatttgcttaagctgattgagtccacgagcaccatg
gacggagccatcgccgcagccttgctgatgttcggagacgcagagggtggtggacccagg
aaaaggaaattgtcttcttctccagagcggtatgtggaagacgactttagcgacgagcag
tgcgtgaagaagaagaaactggaccatgaagaagagcccagcgagtctgcggagtcgagc
ggcagctgggagcagcaggaaaggatcgtgctgaagctgcagaaggagtttcccaacttt
gacaagcaggagctgagggaagtgctcaaggagcatgagtggatgtacacggaagcgtta
gagtcgctgaaagtgttcgcagaagaccaagacacgcagtattctgcacagagcgagttt
ccaaatgggaaggaagcttcttcaagaagtcagagttaccctaagcccgcgagtaaaaaa
ctgaaacagaagtgctccctgaagccccaaaatggttttaacaagaagcgcaaaaaacac
gtgctcaaccccaagagggtcgtggaggactcggagtacgactcgggctcggaggcgggc
agctcgctggacgaggactacagcagcggggaggaggtggtgggcgacggctaccagggc
aagatcctgcacttcctgcaggacgcgtccgtgggcgagctcacgctcatcccgcagtgc
tcacagaagaaggcccagaagatcacggagctccggccctttaacagctgggagtcgctg
ttcaccaagatgtccaagaccaacgggctgtcggaggacctgatctggcactgcaagacg
ctgatccaggagagggacgtggtcatccggctgatgaacaagtgcgaggacatctccaac
cggctgaccaagcaggtcaccatgctgaccgggagcgggggcggctggaacaccgagcag
ccgtccatcctcaaccagagcctgtcactcaaaccctaccagaaggtcggtctgaactgg
ctggcgctggtgcataagcacgggctgaacggcattctggcggatgaaatgggcctagga
aaaactattcaagccattgcattcctggcatacctctaccaagaggggaataaagggcct
catttgatcgtagtgccagcctcaaccatagataactggctccgggaggtgaagctctgg
tgcccggcgctgaaggtgctctgctactacggttcccaagaggaacggaagcaaatcagg
tacaacatccacagtaaatacgaggagtacaacgtcatcgtgaccacgtacaactgtgcc
atcagcagttccgacgaccggagtctgtttcgaaggctgaaacttaattatgcgattttt
gacgagggccacatgctgaaaaacatgggctccatccgctaccagcatctgatgacgatc
aacgccagcaaccgcctgctgctcacgggcacgcccgtccagaacaacctgctggagctc
atgtccttgctcaacttcgtcatgccccacatgttcagcagcagcaccggcgagatccgc
aggatgttctcctccaagacgaaatctgccgacgagcaaagtatatacgaaaaagagaga
atagcacacgcaaagcaaatcataaagccgtttattctcaggagagtgaaagaagaggtc
ctcaagcaactgccgcccaagaaagatcgaattgagctgtgtgcaatgtccgagaagcag
gagcagctgtacctgagtcttttcaacaggatgaaaaagtccatcaacaacctggagaag
aacaccgagatgtgcaatgtcatgatgcagctgcgcaagatggccaaccacccgctgctg
caccggcagtactacacgcccgagaagctccgggaaatggcccagctcatgctgaaggaa
ccgacccatcgtgaggctaaccctgacctgatttttgaagatatggaggttatgacggac
ttcgaattaaacgtactttgtaaacagtatcggcacatcaataacttccagttagacatg
gatttgattttagattctgggaagtttcgcgttttaggatgcatcttgtctgaactgaaa
cagaagggcgatagagtcgtcctgttcagccagttcaccatgatgctggatattctcgag
gttctcctgaagcaccatcagcacaggtacctcagactggacgggaagacgcagatatca
gaaagaattcatctcattgatgagttcaacaccgatatggatatcttcgtgtttctgctg
tcgacaaaagctggtggcctcggaatcaacctgacttcagctaatgtcgttattctgcac
gacatcgactgcaacccttacaacgacaagcaggcagaggacaggtgccaccgagtcggc
cagacgaaagaagtgctagtcataaaactcataagccaagggacgatcgaagaatccatg
ctcaaaatcaaccagcagaagctgaagctcgagcaggatatgacgactgctgacgaaggg
gacgagggcagcgtgcccgccgacatcgccacgctgctcaggacgtccatgggcctgtga
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