Sorex fumeus (smoky shrew): 130015969
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Entry
130015969 CDS
T10594
Symbol
CFAP46
Name
(RefSeq) LOW QUALITY PROTEIN: cilia- and flagella-associated protein 46
KO
K24938
cilia- and flagella-associated protein 46
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sfum03037
]
130015969 (CFAP46)
Cilium and associated proteins [BR:
sfum03037
]
Motile cilia and associated proteins
Sperm associated proteins
130015969 (CFAP46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_CFAP46_N
TPR_19
TPR_12
Motif
Other DBs
NCBI-GeneID:
130015969
NCBI-ProteinID:
XP_055962685
LinkDB
All DBs
Position
Unknown
AA seq
2605 aa
AA seq
DB search
MDLVLMQELTHAENQNDASALQRAYDLIKSSNMGKSELDPVESFSPDLLVLCAERALKMG
RPELAEDCIRMYFKVKGPVTQFLGRAHLCRAQLSAPKSTENLEEFENCVTEYMKVISFAK
AEPRYHFLVYNASVLYWQMVRPFLKPGYHHYLIPSLSHIVSVLNQTEEEDVEWRAELMLG
LLECYLQAGKTEEASKFCSITAPFIKASVPQKYRQIFALMVQYELMDEQQLKEETKASIS
LFATFHLNQIKAKLEKGEVPEDFVETLEQSHKQLGQYDHENFPSIKEEKMLLLFELAHLA
LTLKCQKIASDCLSDLKKMSDTDPGKLIEIECLEGELEALGLESAMTSYLRSAVETQLSI
TQRLDVALQQALRLGDPRVIHVVCATQWNLCLPLLQHNLRARLRGQLSTIAHALERMDSL
MLQLRCQVHMELAHIEKDEDRLELAMGHLRKALRLDSLGLHQEKLQLSLSQLRLYTTLYH
SPERAEDRAALAIEQAKKATPKDSVRKKRALLVNAGLALAPDTFQIVLDSENEAKVSTGK
HRGRFTYLFAKARHHILCVEKAAGHLRRLGNKNNQERVWIWTELVKVARKQGVWDVCRTA
CRFCLLYDGVNAKKLLRATRKGAGRKRRGQDNLLLEAQTQSDLSVLPPELKRKFAEVGFI
CGEATIQLLQAEGVRLNDSPRPPEDLSQHAAGFVLESPEDNEEWLLYSTWIASLSQLAMS
SWLRAAEIGRELQEAWVVQNAMAYVLNHNYHLIVAGRQKELVGALQQLLGIIKSMGHCGD
PLIEASVCNNLARGLILSWIPAHPPERSRKAVRSNLQHVPLDANAASEIGTAVEVCELAL
SLSGGAVPGEDVPVQVRQQLIATWVKAKQLLQQQIGPRLVPEEGTSEKVSAVSKVLVALE
MFSCNGLGLMDFTVPPLAQVVSMASECRWTDPVVELQAHMRLAHFAYAARNHELTVACAQ
KAVQMAITLLRVTNPAEVPLLAEMLSSTCYVQGRSIIENMKGQKRLRHVAARAFLEGVRF
AGIAENSALVLLGARHFWNSWLPMLGSAASRKMCRSSLQKVIHIINKTEAKKPKKRKILL
LHQWPTADFQSGGISEGYFLPGAEEDLTLRAALYGLLFHSYADNEDWAGGLKVLGEAAQV
LPRTPHRLLIFKHMIIVKAKLGQTFLMEIQKFKDESEDYLAHMWYRLALNSKSIHGQMMC
YQNAIQALQRPESRWQKVDYILEFSKWLYYRQFPLNNVVFLLQWAIHILLRMGAPREAPE
PAEEPPEKAESPKPSPGGWERLRSVRQLEALARAHTLLALVTAASSPRYDDHCLLACAFF
QHIWKVSFQAVQQAISENKIRVAGSTHTVVGSTHSLLNKKERDKKKERERGKEEKTKEPS
KELKPHLEDLPASITEWASYFCPVEMVSVLQMDRSDFTVNAVSIPKPTYTLYYVDQLVKA
LQKLSLHQLTVPLLQLGVLIADSVLENQSIKDLYHLRLALVCTELGLKEAAAQHEDVVGQ
VYITEAEQASCRKEMALLKEKNKDVLLDSEPQPQRPDTVQHELPKPLVAKDKILKMKEEN
RKVLEGTSFPHLWTLKAEVLLEMELYQPARLLLSEAHLAFQELGDPFAQSRCLCLLAQLA
NKERDFRGARRMVEEAQRLGGGEEFWLRSTLTLAEAILSMGPRRQNMEVPRLLQRLIGAF
EVLKKERPNRAPVLERMMVELESRFLSMQVRSAREQLGLGLQLLCQLDASLVDLEKRLRG
GGGGGEKCVDVMLERVEIKKLCAQREESEEARAAYYLEAFGLASEAVARGEARYHTIRFL
LAHHEVQTPSSPVAWSLAHLKLGLVELSLELLQLLWQEARARQAEQSTMGKVLAEYLLSV
RELSASTVRWLALGRTLAHSMLAQLGSLQPLVAHCPPLRARYLGLAGKALRLLAEQAAPL
HPAFRWGDGPSVGARGWGHQGCGEAAEPSILQGLRRDWEAEENKSSRATLTSPREAPSEL
FTQKSWELKRRLLQAQRYLAQASEVLLQGLHVALGQRLLDVAAAASLQMVECVGTLDPFA
ACQFLALSQSCSASGSMREVLLAATANTGSSQLAALLHLEQRLRQLGRTNTRLFASVERR
LDTTFKAWQSLGVTEQHFSLLGDLAPAYRLLLLHHGPDRAHLYGAAYERAQVTPTARGKQ
THTGGACRVARAAVSPEAFSALLAGVHQFQEQTQVAGQGPGQPGAEGRWXVRVSPCSCPT
GEERRRPXQLADLLRPLEQYLAPLSPLLAWALDNRTQNPQAVPDVGKAKGRDKDRRPSTV
QGEPVQPEPADSIVVIADQPLLELPLEGLTVLAEAPATSLSRDFSLQMLSERLRKAETDG
SLRLESKALRKSVPSKKGKKAAIRTLPPDCAIVDTDGIKYIVDPSEEDQDSEPLSPVCVA
QEILDRFQESLTTHWTGHLGRASFPSQADWERALGGCSGFFFYGMDPFLSHLRAERLVAM
NLEDCRLMVLLDLTSSQRTTRRCRQLAESGSLSSQRALEKPVETAVLLSLAGVRSVLSNQ
WPTELAANVLRAGMLWENLLQSARPIGRALRALQKMGADDLMKPEELPPVLRARLSLVQE
QLPGADWPAVTLNSVLYGLPRQVIG
NT seq
7818 nt
NT seq
+upstream
nt +downstream
nt
atggacctggtcctcatgcaagagctgacccacgccgagaaccagaacgatgcgtccgcg
ctgcagcgggcctacgacctgatcaagtcgtccaacatgggcaagtcggagctggacccc
gtggagagcttcagtcccgacctgctggtcctgtgtgcagagcgggccctgaagatgggg
cggccagagctggccgaggactgcatccggatgtacttcaaggtcaagggccccgtcacc
cagttcctgggccgagcccacctgtgccgggcccagctgagcgcccccaagtccacagag
aacctggaggagtttgagaactgtgtcaccgagtacatgaaggtcatcagctttgccaaa
gccgagcccaggtaccacttcctggtgtacaacgcctcggtcctctactggcagatggtc
aggcccttcctcaagccgggctaccaccactacctcatccccagcctctcccacatcgtc
agcgtgttgaaccagactgaggaggaggacgtcgagtggcgggcagagctgatgctgggg
cttcttgagtgttatctccaggctgggaaaacagaggaggcctcaaaattctgttccatc
acagcaccgttcattaaagcttccgtgcctcagaaatatcgacaaatatttgctcttatg
gtgcagtacgaactaatggatgagcagcagttaaaggaggagacaaaagcttccatcagt
ctgttcgccactttccacctgaatcagataaaagcaaaattggagaaaggtgaagtacct
gaagatttcgtcgaaactctggagcagagtcacaagcagctgggccagtatgatcacgag
aactttccttcaatcaaagaggaaaagatgcttttgctctttgaattggctcatctcgct
ttgaccttgaaatgccagaaaatcgcttccgactgcttgtcagacctaaagaagatgtcc
gacacagaccccgggaagctcattgagatcgagtgcctggagggcgagctcgaagccctg
ggcctggagagcgccatgacgtcctacctgcgctccgctgtggagacccagctgagcatc
acccagcgactggacgtggccctgcagcaggccctgcgcctgggcgacccgcgggtcatc
cacgtggtgtgcgccacgcagtggaacctgtgcctgccactcctgcagcacaacctccgt
gcccggctgcgcggacagctcagcaccatcgcgcacgcgctggagaggatggacagcctc
atgctgcagctgcgctgccaagtgcacatggagctggcgcacatcgagaaggacgaggac
cggctggagctcgccatgggccacctgcggaaggccctgcggctcgacagcctgggcctc
caccaggagaagctgcagctgtccctcagccagctgcgcctctacaccacgctctaccac
agccccgagcgcgccgaggacagggccgccctggccatcgagcaggccaagaaagccacc
cccaaggacagcgtgcgcaagaagcgggcgctcctggtgaatgccggcctggccctcgcc
ccggacaccttccagatcgtgctggacagcgagaacgaggccaaagtctccaccgggaag
caccgaggccgcttcacctacctcttcgccaaggcgcgtcaccacatcctctgcgtggaa
aaggccgcagggcacctgagacgcctggggaacaagaacaaccaggagagggtctggatc
tggacggagctggtgaaggtggcccggaagcagggtgtgtgggacgtgtgccggacggcg
tgccgcttctgcctgctctacgacggcgtcaacgcgaagaagctgctgagggccacccgc
aagggggcagggaggaagcgacgaggccaggacaacctcctgctggaggcgcagacgcag
tcggacctgagcgtgctgccccccgagctgaagagaaagttcgcggaggtgggcttcatc
tgcggcgaggccaccatccagctgctccaggcagagggggtgagactgaatgacagcccc
cgtccccccgaggacctgagccagcacgcggccggcttcgtgctggagtccccggaggac
aatgaggagtggcttctgtacagcacgtggatagcgagcctgtcccagctggccatgagc
agctggctgcgggccgccgagattggccgtgagctgcaggaggcgtgggtggtgcagaac
gccatggcgtacgtgctgaaccacaactaccacctcatcgtggccgggcggcagaaggag
ctggtgggcgccttgcagcagctcctgggcatcatcaagtccatgggccactgcggagac
cccttgatcgaggcctccgtgtgcaacaacctcgcccgaggcctgatcctcagctggatc
ccggcccaccccccggaaaggtctagaaaggccgtgcgctcgaatctccagcacgtgccc
ctggacgccaacgccgcctcggagatcgggaccgcggtggaggtctgcgagctggccctg
agcctgtccgggggggccgtgcccggggaggacgtccctgtccaggtgcgccagcagctc
atcgccacctgggtgaaggccaagcagctgttgcagcagcagatcgggccgcggctggtc
cccgaggagggcaccagcgagaaggtcagcgccgtgagcaaggtcctcgtggctctggag
atgttctcatgcaacgggctgggcctcatggacttcaccgtgcccccgctggcccaggtc
gtgtccatggcgtccgagtgcaggtggacggaccccgtggtggagcttcaggcccacatg
aggctggcccactttgcctacgcagcccgcaaccacgagctgaccgtggcctgcgcgcag
aaggccgtccagatggccatcacgctcctgagggtcaccaacccggccgaggtccctctg
ctggccgagatgctgagcagcacctgctacgtccagggccgcagcatcatagagaacatg
aagggccagaagaggctgcggcacgtggcggccagggccttcctggagggcgtaaggttc
gctggcattgccgagaacagcgccctggtgctgctgggcgcgcggcacttctggaactcg
tggctccccatgctgggctcggcggccagcaggaagatgtgccggagcagcctgcaaaag
gtcatccacatcatcaacaagacggaggccaagaagccgaaaaagagaaagatactgctt
ctgcatcagtggccgacggcagacttccaaagcggagggatcagtgaaggctacttcctc
ccaggtgctgaggaagacctgacactgcgggctgccctctacggcctcctgttccacagc
tatgctgacaatgaggactgggcgggcggcctcaaggtgctgggcgaggccgcccaggtg
ctgccgcggaccccacaccggctcctgatcttcaagcatatgatcatcgtcaaggccaag
ctggggcagacgttcctgatggagatccagaagttcaaggacgagagcgaggactacctg
gcgcacatgtggtaccgcctggccctgaactccaagagcatccacggccagatgatgtgc
taccagaacgccatccaggccttgcagaggccggagagcaggtggcagaaggtggactac
atcctggagttcagcaagtggctgtactacagacagttcccactgaacaacgtggtcttc
ctgctccagtgggccatccacatcctgctgcggatgggggcccccagggaggcgcccgag
ccggcagaggagcccccggagaaggccgagagcccgaagccgagcccgggcggctgggag
aggctgcgcagtgtgcggcagctggaggcgctggcccgggcccacacgctgctggcgctg
gtgaccgcggcctcctcgcctcgctacgatgaccactgcctgctggcctgcgccttcttt
cagcacatctggaaggtttcttttcaagcggtacaacaagccatttctgagaataaaatc
agagtagcaggcagcacgcacacagtcgtaggcagtacccactcgttgctgaacaaaaaa
gagagggacaagaagaaggagagggagagagggaaggaggagaagaccaaggagccgagc
aaggagctgaagccgcatctggaagatctcccggcgagcatcaccgagtgggcgtcctac
ttctgccctgtggagatggtgtccgtgctccagatggacaggagcgacttcacggtcaac
gccgtcagcatcccaaagcccacgtacacgctgtactacgtggaccagctggtgaaggcc
ctgcagaaactgtctctgcaccagctcaccgtcccactcctgcagctcggggtgctgatc
gccgactccgttctagagaaccagagcatcaaggatctctaccacctccggctcgccctg
gtctgcacagagctgggcctgaaggaggccgcggcccagcacgaggacgtggtcggccag
gtgtacatcactgaggcagagcaggcgagctgtaggaaagagatggctctgctgaaggaa
aagaacaaggacgtcctgctggacagcgagccccagccccagcgcccggacaccgtccag
catgagctccccaagcccctggtggccaaggacaagattctgaagatgaaggaggagaac
aggaaagtcctggaaggcacatccttcccccacctgtggacgctcaaagcagaggtcctg
ctggagatggagctttaccagcccgcgaggctgctcctctctgaggcccacctggctttc
caggagctgggggaccccttcgcccagtcccggtgcctgtgtctgctggcgcagctggcg
aacaaggagcgagatttcaggggcgccaggcggatggtggaggaggcccagcggctgggg
ggtggcgaggagttctggctccgctccacgctgaccctggccgaggccatcctgtccatg
ggcccgagacgccagaacatggaggtcccccggctgctacagagactcatcggcgccttc
gaggtgctcaagaaggagcggcccaaccgggcccctgtcctggagcgcatgatggtagag
ctagagtccaggtttctgagcatgcaggtccggagcgcccgggagcagctgggcctgggc
ctgcagctgctgtgccagctggacgcgtcgctggtggacctggagaagaggctgcgcgga
ggcggcggaggcggcgagaagtgcgtggacgtcatgctggagcgcgtggagatcaagaag
ctgtgcgcccagcgggaggagagcgaggaggcgagagccgcgtactacctggaggccttc
ggcttggcttccgaagccgtggccagaggggaggcacgctaccacaccatccgcttcctg
ctggcccaccacgaggtgcagacgcccagcagccccgtggcgtggagcctggcgcacctc
aagctgggcctggtggagctctccctggagctgctgcagctgctgtggcaggaggcgcgg
gcgcggcaggcggagcagagcaccatgggcaaggtgctggccgagtacctgctcagcgtc
cgggagctcagcgccagcactgtgaggtggctggcgctggggcggaccctggcgcactcg
atgctggcccagctgggcagcctgcagcccctggtggcccactgccctccactccgtgcc
cgctacctgggcctggccgggaaggccctgcgcctgctggccgaacaggctgccccgctg
caccccgccttccgctggggggacggaccctcggtaggtgccagaggctgggggcatcag
ggctgcggggaggccgcagagccaagcatcctgcagggcctccgtcgggactgggaagcc
gaggaaaacaagtcctccagggccaccctgaccagccccagggaggcgccctccgagctg
ttcacccagaagagctgggaactgaagaggaggctgctccaggcccagcggtacctggcg
caggcgtccgaggtgctgctgcagggcctgcatgtggccctggggcagcgcctgctggac
gtggcggcagccgccagcctgcagatggtggagtgtgtgggcaccctggacccctttgcc
gcctgccagttcctggctttgtctcagagttgctcggcctctggctccatgcgggaggtg
ctgctcgcggccacggccaacacgggcagctcacagctggctgcgctgctgcacctggag
cagaggctgcggcagctgggccggacgaacaccaggctcttcgccagcgtggagcggcgg
ctggacaccaccttcaaggcgtggcagagcctgggcgtcacggagcagcacttcagcctc
ctgggtgacctggcgcccgcctaccgcctcctgctcctgcaccacgggccggacagagcc
catctgtacggggcagcctacgagcgggcccaggtcacccccacggcccgagggaagcag
acgcacacagggggtgcctgcagggtggcccgggcggccgtgagcccagaagccttctct
gccctgctggctggcgtccaccagtttcaggagcagacccaggtagccggtcagggccca
gggcagccgggtgcggagggcaggtggtgagtgcgagtgagcccttgctcctgccccaca
ggtgaagagagacggcggcctnngcagcttgctgacctgctgcggcccctggagcagtac
ctggcgcccctgagtccactgctggcctgggcgctggacaacaggactcagaacccccag
gcggtgccggacgtggggaaggccaagggcagggacaaggaccggcggccatccaccgtc
cagggtgagccggtccagcccgagcctgcggacagcatcgtcgtcatcgcggaccagccg
ctgctcgagctgcccctggaggggctcacggtgctcgccgaggcgcccgccacgtccctg
tcccgggacttctccctgcagatgctgagcgagcggctgcgcaaagccgagaccgacggc
agcttgaggctggagagcaaagccctgaggaagtcggtgccgtccaagaagggcaagaag
gcggccatccgcactctgccccctgactgtgccatcgtggacaccgacggcatcaagtac
attgtggaccccagcgaggaggaccaggactcggagccgctgagccccgtgtgtgtggcc
caggagatcttggacaggttccaggagtccctcaccactcactggacaggtcacctgggc
agagcatctttcccgagccaggccgactgggagcgcgcactgggcggctgcagcggcttc
ttcttctacgggatggaccccttcctgtcccacctgcgggccgagaggctggtggccatg
aacctggaagactgccggctgatggtcctgctggacctgaccagctcccagaggaccaca
cgcagatgcaggcagctggcagagagtggcagcctgtcctcgcagcgggccctggagaag
cccgtggagacggccgtcctgctcagcctggccggggtgcgcagcgtgctaagcaaccag
tggcccacggagctggcggccaacgtgctacgggccgggatgctctgggagaacctgctg
cagtctgccaggcccattgggcgggctctgagggcccttcagaagatgggagctgatgac
ctgatgaagccagaggagttgccacctgtgctgagagcaaggctgtccctagtccaggag
cagctcccgggcgccgactggccggccgtcaccctcaactcggtgctgtacgggctgccg
cgccaggtcatcggctga
DBGET
integrated database retrieval system
