Sorex fumeus (smoky shrew): 130016519
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Entry
130016519 CDS
T10594
Symbol
DDX54
Name
(RefSeq) ATP-dependent RNA helicase DDX54 isoform X1
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
Enzymes [BR:
sfum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130016519 (DDX54)
Ribosome biogenesis [BR:
sfum03009
]
Eukaryotic type
Pre-60S particles
Helicases
130016519 (DDX54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130016519
NCBI-ProteinID:
XP_055963216
LinkDB
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Position
Unknown
AA seq
884 aa
AA seq
DB search
MAAGTRAAAAPRRPAPMAQWRKKKGQRRRRGAAPPAQGSDSEDGEFEVQAGDDARAQKPG
PGRPLPSFPSSECTSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPT
PIQRKTIPVILDGKDVVAMARTGSGKTACFLIPLFERLKAHSAQSGARALVLSPTRELAL
QTMKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS
VEYVVFDEADRLFEMGFAEQLQEIIGRLPGGQQTVLFSATLPKLLVEFARAGLTEPVLIR
LDVDSKLNEQLKTSFFLVREDAKAAVLLHLLRSVLRPQDQTVVFVATKHHAEYLSELLTT
QGVSCTHIYSALDQTARKINLAKFTHSKCSVLLVTDLAARGLDIPLLDNVVNYSFPAKGK
LFLHRVGRVARAGRSGTAYSLVAPDELPYLLDLHLFLGRALSLACPGDAPSAGGADGVLG
RVPQTVVDDEDGGLRTALEASQELQGLGRVAGNAQQQYVRSRPAPSPESIKRAKELDVAG
LGLHPLFSSRCEEQELQRQQLVDRIRGYRARATIFEIGASSRDPGGEVMRAKRQRHCGAI
ASFQRDLQARQREQRRREAPVGPAAREEQPQPREEEEGEEEEGGPSVEDVFTEVVGRKRW
QPGPGGRAKRRRGEAQPRDPQFYVPYRPKDFDSERGLSVGGDGGAFEQQAAGAVLDLMGD
EAQNLTRGRQQLKWDRKKKRFVGQTGQEDKKKIKTESGRYISSSYKRDLYQKWKQKQKID
DRDSEDEGPSDRRAPEHRGGRRGRGQGASQPRTPGPPAGRVRSELKTKQQILKQRRRAQK
MRFLQRGGLKQLSARNCRRVQELKKGAFGRGGPFNKKGKMRKKM
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggcacgcgcgcggcggccgctcctcgccggccagcgcccatggcccagtgg
cggaagaagaaggggcagcggcggcgccggggcgcggcccccccggcccagggcagcgac
tcggaggacggcgagttcgaggtccaggcgggagatgacgcccgggcccagaagccgggc
cccgggcggcccctgccctccttcccctcctcggagtgcacctcggacgtggagccggac
acgcgggagatggtgcgggcccagaacaagaagaagaagaagtctgggggcttccagtcc
atgggcctgagctaccccgtgttcaagggcatcatgaagaagggctacaaggtgccgaca
cccatccagaggaagaccatccccgtcatcctggacggcaaggacgtggtggccatggcc
cggacgggcagcggcaagacggcctgcttcctcatccccctgttcgagcggctcaaggcc
cacagcgcccagagcggggcccgcgccctggtcctctcgcccacccgcgagctggcgctg
cagaccatgaaattcaccaaagagctgggcaagttcacaggcctcaagaccgccctgatc
ctcggtggggacaggatggaagaccagtttgcggcgctccatgagaacccggacataatc
atcgccacccccgggcgcctggtgcacgtggccgtggagatgaacctcaagctgcagagt
gtggagtacgtggtgttcgacgaggcggacaggctcttcgaaatgggctttgcagagcag
ctgcaggaaatcatcgggcgcctgcccgggggccagcagacggtgctcttctccgccacg
ctgcccaagctgctggtggagttcgcccgcgcaggcctcacggagcctgtgctcatccgg
ctggacgtggactccaagctcaacgaacaactcaagacctccttcttcctggtgcgcgag
gacgccaaggccgccgtgctcctgcacctgctgcgcagcgtgctacggccccaggaccag
acggtggtcttcgtggccaccaagcaccatgcggagtacctcagcgagctgctgacgacc
cagggggtgagctgcacccacatttacagcgccctggaccagacagcccgcaagatcaac
ctcgccaagttcacacacagcaagtgctctgtgctccttgtcaccgacctggcggcccgg
ggcctggacatcccgctgctggacaacgtggtcaactacagcttccccgccaagggcaag
ctcttcctgcaccgcgtgggccgcgtggcccgggccggccggagcggcactgcctactct
ctggtggcccctgacgagctcccctacctgctggacctgcacctgttcctgggccgcgcc
ctcagcctcgcctgccccggggacgcgccctcggcggggggcgcagacggcgtgctgggc
cgggtgccgcagactgtggtggacgacgaggacggcggcctgcggaccgcgctggaggcc
tcgcaggagctgcagggcctgggccgcgtggccggcaacgcgcagcagcagtacgtgcgc
tcgcggcccgcgccctcgccagagtccatcaagagggccaaggagctggacgtggccggg
ctgggcctgcacccgctcttcagctcacgctgcgaggagcaggagctgcagcgccagcag
ctggtggacaggatccggggctaccgggcgcgggcgaccatcttcgagatcggcgcctcc
agccgtgacccgggcggcgaggtcatgcgcgccaagcggcagcggcactgcggggccatc
gccagcttccagcgggacctgcaggcgcggcagcgggagcagcggcggcgggaggcgccc
gtgggcccggcagcacgggaggaacagccgcagccgcgggaggaggaggaaggagaggaa
gaggagggtggtccgagcgtggaggacgtcttcaccgaggtggtgggccggaagaggtgg
cagccgggacccggcggcagagccaagaggcggcggggggaggcgcagccgcgggacccg
cagttctacgtgccctacagacccaaggacttcgacagcgagcggggcctgagcgtcggt
ggggacggtggtgccttcgagcagcaggcggccggcgccgtcctggacctaatgggggac
gaagcccagaacctcacccgcggccggcagcagctcaaatgggaccgcaagaagaagcgc
tttgtgggacagacgggacaggaagacaagaagaaaatcaaaacggagagtgggcgctac
atcagcagttcctacaagagagacctctaccagaagtggaagcagaagcagaagatcgat
gaccgggactcggaggacgaaggaccctctgaccggcgagcccccgagcacaggggagga
aggcggggccgaggccaaggtgcctctcagccccgcaccccagggccccctgccggccgc
gtgcgttccgagctgaagaccaagcagcagatcctgaaacaacgacgccgcgcgcagaag
atgcgcttcctgcagcgcggaggcctcaagcagctctcggcccgcaactgccgccgggtg
caggagctgaagaagggcgccttcggccggggcggccccttcaacaagaagggcaagatg
aggaagaagatgtga
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