Sorex fumeus (smoky shrew): 130016617
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Entry
130016617 CDS
T10594
Symbol
ZEB1
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum05202
Transcriptional misregulation in cancer
sfum05206
MicroRNAs in cancer
sfum05215
Prostate cancer
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
130016617 (ZEB1)
05206 MicroRNAs in cancer
130016617 (ZEB1)
09162 Cancer: specific types
05215 Prostate cancer
130016617 (ZEB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130016617 (ZEB1)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
130016617 (ZEB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_15
zf-C2H2_6
Zf-C2H2_ZNF451_C
Zn_SUZ12
zf-C2HE
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
130016617
NCBI-ProteinID:
XP_055963306
LinkDB
All DBs
Position
Unknown
AA seq
1125 aa
AA seq
DB search
MNILLIKAYQQMTYGGESYPERYLASTGKGDSPSLQQMATCAVTNYNTVVETNSDSDDED
KLHIVEEESIADAADCEGGVPEDDLPTDQTVLPGSSEREGNAKNCWEEDVKDDECDSDAE
NEQNHDPNVEEFLQQQDTAVIYPEAPEDDQRQGTPEASGHDENGTPDAFSQLLTCPYCDR
GYKRFTSLKEHIKYRHEKNEDNFSCSLCSYTFAYRTQLERHMTSHKSGRDQRHVTQSGGN
RKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCISLMP
VNGRPRTGLKTSQCSSPSLSASPGSPTRPQIRQKIENKPLQEQLSVNQIKTEPVDYEFKP
IVVASGINCSTPLQNGVFSGGGPLQATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLK
VAVDGNVIRQVLENNQANLASKEQETINASSIQQGGHSVISAISLPLVDQDGTTKIIINY
SLEQPSQLQVVPQNLKKENPVPTNSCKSEKLPEDLTIKSEKDKSFEGEANDSTCLLCDDC
PGDINALPELKHYDLKQSAQPPQLPAPETEKPESSVSSGSGDGNLSPTQPPLKNLLSLLK
AYYALNAQPSAEELSKIADSVNLPLDVVKKWFEKMQAGQISVQSSEPSSPEPGKVNTSVK
NDDRAQSTNASESQDNTIHLQSPLKTSNSPVLPVGSTVNGSRSSTSSPSPLNLSSSRNTQ
GYLYTAEGAQEEPQVEPLDLSLPKQQGELLERSTITSVYQNSVYSVQEEPLNLSCAKKEP
QKDSCVTDSEPVVNVIPPSANPINIAIPTVTAQLPTIVAIADQNSVPCLRALAANKQTIL
IPQVAYTYSTTVSPAVQDQQPSLKVIQPNGNQDERQDTSSEGVSNVEDQNDSDSTPPKKK
MRKTENGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHLIEHMRLHS
GEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKREAEERDSTEQEEAGPEVLTSEHVGARA
SPSQVDSDERESLTREEDEESEKEEEEEEDKEMEELQEEKECEQPQGEEEEEEMEEEVEE
AENEEEGAKTEGPMKDDGAVNQASSLEQKVSENSEQVSEEKTNEA
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgaacattttactcataaaggcatatcaacagatgacttacgggggagaaagctatcct
gaaaggtacttggcatcaacaggaaaaggagattctccatcgctgcagcaaatggcaact
tgtgcagttacgaattataatactgtggtagaaacaaattcagattcagatgatgaagac
aaacttcatattgtagaagaagaaagtattgcagatgccgccgattgtgaaggtggggtg
ccagaagatgacctgccaacagaccagacagtgttaccagggagcagcgaaagagaagga
aatgccaagaactgctgggaggaggatgtaaaagatgatgaatgtgactcggatgcggag
aatgaacaaaaccatgaccctaacgtggaagagttcctgcaacaacaagacactgctgtc
atttacccggaagcgcctgaggatgaccagaggcagggcacaccagaagccagcggtcat
gatgaaaatggaacaccagatgcattttcccagttactcacctgcccatattgtgataga
ggctataaacgttttacctctctaaaagaacacattaagtatcgccatgaaaagaatgaa
gataactttagttgctccctgtgcagctacacctttgcttacagaacccaacttgaacgt
cacatgacatctcataaatcaggaagagaccagagacatgtgacacagtctgggggtaat
cgtaaattcaagtgtactgaatgtggaaaagcttttaaatacaaacaccatctaaaagaa
cacttaagaatccacagtggagagaagccatatgaatgcccaaactgcaagaaacgattt
tcccattctggttcctatagctcacacataagcagtaagaaatgtatcagcttgatgcct
gtgaatgggcgaccaagaacaggactcaagacatctcagtgttcctcaccatctctctcg
gcatcgccaggcagccccacacggccacaaatacggcaaaagatagagaataaacccctt
caagaacaactttctgtaaaccaaattaaaactgaacctgtggattatgaattcaaaccc
atagtagttgcttcaggaatcaactgttcaacccctttacaaaatggggtcttcagtggt
ggtggcccattgcaggcgaccagttctcctcagggtgtggtgcaagctgttgttctgcca
acagttggtttggtatctcccataagtatcaatttaagtgatattcagaatgtacttaaa
gtggcagtagatggtaatgtgataaggcaagttttggagaataatcaagccaatcttgca
tccaaagaacaagaaacaatcaatgcttcatccatacaacagggtggccattctgttatt
tcggccatcagtcttcctttggttgatcaggatggaacaaccaaaattatcattaactac
agtcttgagcagcctagccaactccaggttgttcctcagaatttgaaaaaggaaaatcca
gttcctacaaacagctgcaaaagcgaaaagttaccagaagatcttactattaaatccgag
aaggacaaaagctttgaaggagaagcaaatgatagcacttgccttctgtgtgacgattgt
ccaggagatattaatgcacttccagaattaaagcactatgacctaaagcagtccgcccag
ccccctcaactccctgcccctgaaactgagaagcccgagtcttctgtttcatccggttct
ggggatggaaatttgtctcccacgcagccacctttaaagaacctcttatctcttttgaaa
gcatactatgctttgaatgcacagccaagtgcagaagagctttcaaaaattgctgattca
gtaaacctaccgctggatgtagtgaaaaagtggtttgaaaagatgcaagctggacaaatt
tcagtgcagtcctctgaaccatcttctccagagccaggcaaagtaaacacctctgtaaag
aacgatgatcgggctcaatccacaaatgcaagtgaatcccaggacaacacaatacatcta
caaagtcctctgaagacgagtaactccccagttttaccagtgggatcaaccgttaacggt
tccagaagtagtacatcatccccatcacctctgaacctttcctcatccagaaatacacag
ggttacttgtacacagcagaaggtgcacaagaagagccacaagtagaacctcttgatctt
tcactaccaaagcaacagggagaattattggaaaggtcaactatcactagtgtttaccag
aacagtgtttattctgtccaggaagaacccttgaacttgtcttgtgcaaaaaaggagcca
caaaaggatagttgtgttacagactcagaaccagttgtaaatgtaatcccaccaagtgcc
aaccccataaatattgctatacctaccgtcactgcccagttacccacaattgtggccatt
gctgaccagaacagtgttccatgcttgagagcactagctgccaataagcagactatcctg
attccccaggtggcttacacgtactcaactacagtcagccctgcagtccaagatcaacaa
ccatctttgaaagttatccagccaaatggaaatcaggatgaacggcaagacactagctca
gaaggagtatcaaatgtagaggatcagaatgattctgactctacaccacccaaaaagaaa
atgaggaagacagaaaatggaatgtatgcttgtgatttgtgtgataagatattccaaaag
agtagctcattattaagacataaatatgaacacacaggtaaaagacctcacgagtgtgga
atctgtaagaaggcttttaaacacaaacatcatttgattgaacacatgagattacattct
ggagaaaagccctatcaatgtgacaaatgtggaaagcgtttctcacactctgggtcttac
tctcaacacatgaatcatcgctactcctattgcaagagagaagctgaagaacgtgatagt
acagagcaggaagaggcaggaccggaagtcctgaccagtgagcatgttggtgctagggca
tctccctctcaggtcgactcagacgagagagagagtttgacaagggaagaagatgaagag
agtgaaaaagaggaagaggaggaggaagataaagagatggaggaactgcaggaagaaaaa
gaatgtgaacaaccacaaggtgaagaggaggaggaggagatggaggaggaagtagaagag
gcagagaatgaagaagaaggagccaaaactgaaggtccaatgaaggatgatggagctgta
aatcaagcaagcagcttggaacaaaaagtaagcgaaaacagtgagcaagtgtccgaagaa
aaaacaaacgaagcctaa
DBGET
integrated database retrieval system
