Sorex fumeus (smoky shrew): 130016633
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Entry
130016633 CDS
T10594
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03040
Spliceosome
sfum05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130016633
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
130016633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfum03019
]
130016633
03041 Spliceosome [BR:
sfum03041
]
130016633
Messenger RNA biogenesis [BR:
sfum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
130016633
mRNA cycle factors
Common to processing body (P body) and stress granule
130016633
Spliceosome [BR:
sfum03041
]
Common components
Common spliceosomal components
hnRNP proteins
130016633
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
HnRNPA1_LC
Nup35_RRM_2
Keratin_2_head
Motif
Other DBs
NCBI-GeneID:
130016633
NCBI-ProteinID:
XP_055963330
LinkDB
All DBs
Position
Unknown
AA seq
314 aa
AA seq
DB search
MSRPESPQEPEQLRKIFVGGLSFETTDASLRNHFEQWGTLTDYVVMRDPHTRRSRGFGFV
TFSTMGAVDAVMNARPHKVDGRYVEPKRAISREDSQMPGAHFTVKKIFVGGIKEDTEECH
LREYFKRFGNIEMIDVITDKGSGKRRGFAFVTFDDHDSVDKIVIQKFHIVNGHNCEIRKA
LSKQEMARVSSNLRGHRGSRNFGGGYGGAFGGNASFLYGGGISGQGAFGGSMGSGGFGSS
AFGYQGYGNNSRSFLSGGSYSDLGSYTTPYSYFGPMKEGNFGDPNSGPYSDISQHFSKPR
NKGGYRGSSSDKKL
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgtctaggccagagtctccccaggagccggaacagctgcggaaaatttttgttggaggg
ctgagctttgaaacaactgatgcaagtctgagaaatcattttgagcaatggggaacactc
acagactatgtagtaatgagagatccccacaccaggcgctcccgaggctttgggtttgtc
acattcagcaccatgggggcagtggatgcagtcatgaatgcaaggccacacaaggtggac
ggaagatatgtggaaccaaagagagctatctcaagagaagattcccaaatgcctggtgct
cacttcaccgtgaaaaagatttttgttggtggcatcaaagaagacacagaagagtgtcac
ctaagagagtattttaaacgctttgggaacattgagatgattgatgtcataactgacaaa
ggcagtggaaagaggagaggctttgcttttgtgacttttgatgatcatgattctgtagac
aagattgtcattcagaaattccatattgtgaatggccacaactgtgaaataagaaaagcc
ttgtctaagcaagagatggctagggtttcatccaacctaaggggccaccgtggttctaga
aattttggtggtggttatggaggtgcttttggtgggaatgccagctttctctatggagga
ggcatcagtgggcaaggtgcttttggtggcagcatgggtagtggtggatttggtagtagt
gcatttggctatcagggatatggtaacaatagtagaagttttctaagtggtggaagttac
agtgatttgggcagttacactactccgtattcatattttgggcctatgaaagaaggaaac
tttggtgacccaaactcaggcccctatagtgatatcagccaacatttttccaaaccacga
aacaaaggtggttatcgtggttccagcagtgacaaaaagctttaa
DBGET
integrated database retrieval system
