Sorex fumeus (smoky shrew): 130016734
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Entry
130016734 CDS
T10594
Symbol
CTCFL
Name
(RefSeq) transcriptional repressor CTCFL
KO
K23195
transcriptional repressor CTCF
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130016734 (CTCFL)
03036 Chromosome and associated proteins [BR:
sfum03036
]
130016734 (CTCFL)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
130016734 (CTCFL)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130016734 (CTCFL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_16
zf-Di19
Zf-C2H2_ZNF451_C
zf-C2H2_REST
zf-C2H2_7th_ZNF462
zf-C2H2_ZN142
zf-C2H2_15
Zf-C2H2_ZNF451
Zn_ribbon_8
zf-met
Motif
Other DBs
NCBI-GeneID:
130016734
NCBI-ProteinID:
XP_055963439
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MAAPGAPFTHIKEPERRGGAQDGLQVPDVAQEVVLSASADGEGPPAAGPPAPLQLLQLRV
LEEPSGAAAPPDRSLAAVLELGRVDGPAQLADAQLLLLEARTGEGGNEEIVLTICNVKVD
VQGAQRAPGAAAGPTPAVGSSAPPASASTAAADPRPRIAPTPGARRTFQCEFCVFTTSRA
SSFSRHVRTHTDERPHVCHLCPKAFRTMTLLRNHVYTHTGTRPFQCGDCAMAFVTSGELI
RHQRYKHTHEKPFKCSLCKYASVEASKLKRHLRSHTGERPFPCSLCSYASRDTYKLKRHM
RTHSGEKPYECPVCQARFTQRGTMKIHLVQKHSDNVSKHQCPHCATLIARKSDLRVHLRK
LHRTLATELKCRFCPAAFRERYALLQHQKTHRDEKRFKCEYCSYACTQERYLVMHTRTHT
GERPFACAVCGKTFQRKTLLTRHHRKHHEARGPPGAFQCPSCARSFSRRNNLQKHAEQCL
GEKGKGRKTRKRKAAEPGGAEGAHAAAALEATDDTQGKPGPGGPGATPMAPAEEGTCAQM
LCATEQ
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccccggcgcccccttcacgcacatcaaggagcccgagcgccgcgggggcgcg
caggacggcctgcaggtgcccgacgtggcgcaggaggtggtgctgagcgcgtcggcggac
ggcgaggggcccccggccgcgggaccccccgcgccgctgcagctgctgcagctccgcgtg
ctggaggagccctcgggggccgccgcgccccccgaccgcagcctggccgccgtgctcgag
ctcgggagggtggacggcccggcccagctggccgacgcgcagctgctgctcctggaggcc
cgcaccggggagggaggcaacgaggagatcgtgctgaccatctgcaacgtgaaggtggac
gtgcagggggcccagcgtgcgcccggggcagcggccggccccaccccagccgtgggcagc
agcgcgccgccggccagcgcgtcgacagcggcagcggacccccgaccccgcatcgccccc
accccaggagcgaggagaaccttccagtgcgagttctgcgtcttcaccacgtcgcgcgcg
tccagcttcagccgccacgtgaggacgcacacggacgagaggccgcacgtgtgtcacctg
tgccccaaggcgttccgcaccatgacactgctgcggaaccacgtctacacgcacacgggg
accaggcccttccagtgcggggactgcgccatggccttcgtcaccagcggcgagctcatc
cgccaccagcgctacaagcacacgcacgagaagcccttcaagtgctccctgtgcaagtac
gcgagcgtggaggcgagcaagctgaagcggcacctgcgctcccacacgggcgagcgcccc
ttcccgtgcagcctctgcagctacgccagcagggacacctacaaactcaagcgccacatg
cggacacactcgggcgagaagccctacgagtgccccgtctgccaggcccgcttcacgcag
cggggcaccatgaagatccacttggtgcagaagcacagcgacaacgtctccaagcaccag
tgtccccactgcgccaccctgatcgcccggaagagcgacttgcgcgtgcacctgcggaag
ctgcaccggaccctggccaccgagctgaagtgccgcttctgccccgccgccttccgggag
cgctacgccctcctccagcaccagaagacgcaccgggacgagaagcgcttcaagtgcgag
tactgcagctacgcctgcacgcaggagcgctacctggtcatgcacacgcgcacccacacc
ggagagaggccgttcgcctgcgccgtctgcggcaagactttccagcggaagacgctgctc
acgcggcaccaccggaagcaccacgaggccaggggcccccccggcgccttccagtgtccg
agctgcgccaggagcttctcccgccggaacaacctgcagaagcacgcggagcagtgccta
ggggagaaggggaaggggaggaagacgcggaagagaaaggcggccgagcccggaggcgca
gagggggcccacgccgctgctgccctggaggccaccgatgacacacagggcaagccgggc
ccgggggggccaggggccacccccatggccccggcggaggagggcacctgtgcccagatg
ctgtgcgccacggagcagtga
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