Sorex fumeus (smoky shrew): 130016917
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Entry
130016917 CDS
T10594
Symbol
DDX6
Name
(RefSeq) probable ATP-dependent RNA helicase DDX6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03018
RNA degradation
Brite
Enzymes [BR:
sfum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130016917 (DDX6)
Messenger RNA biogenesis [BR:
sfum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
130016917 (DDX6)
mRNA degradation factors
5'-3' decay
Decapping complex
130016917 (DDX6)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Gene silencing
piRNA pathway
130016917 (DDX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130016917
NCBI-ProteinID:
XP_055963621
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All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MSTARTENPVIMGLSSQNGQLRGPVKPSGGPGGGGTQTQQQMNQLKNTNTINNGTQQQAQ
SMTTTIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPS
PIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQV
SQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHV
QMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINL
MEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYS
CFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLH
RIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVED
EKP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggccagaacagagaaccctgttataatgggtctttccagtcaaaatggtcag
ctgaggggccctgtgaagcccagtggtggccccggaggagggggcacacagacacagcaa
cagatgaaccagctgaaaaacaccaacacaatcaataatggcactcagcagcaagcccag
agtatgaccaccactattaaacctggtgatgactggaaaaagactttaaaactccctcca
aaggatctaagaatcaaaacttcggatgtaacctccacgaaaggaaatgagtttgaagat
tactgtttgaaacgggagttactgatgggaatttttgaaatgggctgggaaaagccatct
cctattcaggaggagagcattcccattgctttatctggtagggatatattagctagagca
aaaaacggaacaggcaagagcggtgcctacctcattcccttacttgaacggctagacctg
aagaaggacaatatacaagcaatggtgattgttcccactagagaacttgctctacaggtc
agtcaaatttgcatccaggtcagcaagcatatgggaggggccaaagtgatggcaaccacc
ggaggaaccaatttacgtgatgacataatgagacttgatgacacagtgcacgtggtgata
gccacacctgggagaatcctggatcttatcaagaaaggagtcgcgaaagtcgatcatgtc
cagatgatagtattggatgaggctgataagttgctatcacaggattttgtgcagataatg
gaggatattattctcacgctacctaaaaacagacagattttattatattctgctactttt
cctcttagtgtacagaagttcatgaattcccatttgcagaaaccctatgagattaacctg
atggaggaactaacattgaagggagtaacccagtactatgcgtatgtaactgagcgccag
aaagtacactgcctcaacacacttttctccaggcttcagataaaccaatcgatcattttc
tgtaactcctctcagcgagttgaattactagccaagaagatttctcaactgggttattct
tgcttctatatccatgctaaaatgaggcaggaacatcgaaatcgtgtgtttcatgatttc
cgaaatggcttatgccgcaatcttgtttgcactgatttgtttacccgaggtattgatatt
caagctgtgaatgtggtaataaactttgacttcccaaagctggcagagacctatctccat
cgaattggaagatcaggtcgctttggtcatcttggcttagccatcaacttgatcacatat
gatgatcgcttcaacctaaaaagtattgaggagcagctgggaacagagatcaaacctatc
ccgagcaacattgacaagagcctgtatgtggcagaataccacagcgagcctgtagaagac
gagaaaccttaa
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