Sorex fumeus (smoky shrew): 130017284
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Entry
130017284 CDS
T10594
Symbol
SOX30
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130017284 (SOX30)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
130017284 (SOX30)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
130017284
NCBI-ProteinID:
XP_055963942
LinkDB
All DBs
Position
Unknown
AA seq
743 aa
AA seq
DB search
MERARPEPPRQLPRAVPPRPLRPAPPPPPLLDGAAAAAFRGTAAEPPRSPPAPCAAAALA
AVASPCGDAAAPGVQPAARRLLQLKTEQVLLLPPSARDDGPAGTPAQARLLPLRPELLLL
PPPPDGAPCRPDAHPAAARAPHVKAEHPEPGPARACRATPDGRRGGDEKPGRWEAADGPS
DAAEGGGGGIKTEEPERGREDGRPGPAEPPAANGLVPGAKELLLAAPPGAFGPPAPAAPQ
PPDLRLPLTLHPVPPGARIQFQGPPPPELIRLTKVPLTPVPIKMQSLLEPSVKIETKDVP
LTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLE
WNKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRPGKRKRFPLSVSNVFSGTTQNIIST
NPTTVYPYRSPTYSVVIPSLQNTITHPVGDAPPTIQLPTPTVQRPSPITLFQPSVSSAAP
VAVQPSSLPLRPAPQPQRLAGPSPTDPHRPHSGASRPVKRPTPISLDSSSSSRIPVSASA
SAGHARFAASTVQPPKEYPSVSTCPRSAPVPQAPPLPHSHVYQPPPLGHPATLFGTPPRF
SFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSSMPECLGYYEDRYQKHEAIFSALNRDY
PFRDYTEERTHSEDSRSCESLDGTPYYNSNSHSGEEYLGPMPQLDMGALDNVFTAPTAAP
SSIQKVNVTDSDEEEEEKVLRNL
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggagagagcccggccggagccgccgcgccaactgccgcgggcagtcccgccgcgcccg
ctgcgcccagctccgccgcccccgccgctgctcgacggcgccgccgccgccgcctttcgg
gggaccgcggccgagcccccccggtcgccgcccgcgccgtgcgccgccgccgcccttgcg
gccgtggcctcgccgtgcggggacgccgcggcgccgggcgtgcagcccgcggctcggcgc
ctgctgcagctgaagacggagcaggtgctgctgctgccgccgtcggcccgggacgacggg
cccgccgggacccccgcgcaggcgcggctgctgccgctgagacccgagctgctgctgctg
ccgccgccgcccgacggcgccccctgcaggcccgatgcccacccggccgcggcccgggcg
ccgcacgtcaaggctgagcatcccgagccggggccggcgcgggcctgcagggcgaccccc
gacggccgccgcggcggggacgagaagccgggccgctgggaggcggccgacggcccgagc
gacgcggcggaaggcggaggcggcggcatcaagacggaggagcccgagcggggccgcgag
gacgggcgcccgggccccgccgagccccccgcggccaatgggctggtgcccggcgccaag
gagctgctgctggccgcgccgcccggcgccttcggcccccccgcccccgccgccccgcag
ccgccggacctgcggctcccgctcacgctccatcccgtcccgcccggggcccgcatccag
ttccaggggccgccgccccccgagctgatccggctgaccaaggtccccctgaccccggtg
cccatcaagatgcagtccttgctggagccgtcggtcaagatcgagaccaaagacgtgccg
ctcaccgtgctgccctccgacgcaggaataccagatactcccttcagtaaggacagaaat
ggtcacgtgaagcgacccatgaacgcgtttatggtttgggcaaggatccaccggccagca
ctagccaaagctaacccagccgccaacaatgcagaaatcagtgtccagctcgggctagag
tggaacaaacttagcgaagagcaaaagaaaccctattatgatgaagcacaaaagattaaa
gaaaagcacagagaggagtttcctggatgggtttaccagcctcgcccagggaagcgaaaa
cgcttccctctaagtgtttccaatgtgttttctggtaccacacagaatatcatctctaca
aatcctacaacagtctacccttaccgctcacccacctactctgtggtaattcccagccta
cagaacaccatcactcatcctgttggtgacgcacccccgaccatccagctgcccaccccc
acggtccagcgtcccagccccatcacgctcttccagcccagcgtctccagcgccgccccg
gtggccgtccagccgtccagcctgcccctgcgcccggcaccccagccccagcgcttggcg
gggccctccccgacggaccctcaccggccgcactccggggccagccgcccggtgaagcga
cccacccccatctccctggacagcagcagcagcagcaggatcccggtcagcgccagcgcc
agcgccggccacgccagattcgccgcctccaccgtccagcctcccaaggagtaccccagc
gtttccacgtgtccccggagcgcacccgtgccccaggcccctcccctgccgcactcgcac
gtctaccagccccctcccctgggccacccggccacgctgtttgggacaccaccgcggttc
tctttccatcacccctacttcctccctggacctcactacttcccatcaagcacctgccct
tatagtcggcctccctttggctatggcaatttccccagctccatgccagaatgcctcggt
tattatgaagacagataccaaaagcacgaggctatattttcagctttaaacagagactat
ccttttagagactacactgaggaacgcacgcacagcgaagattctcgaagttgtgagagc
ctggacgggaccccttactataacagtaacagccacagcggggaagagtacctgggcccc
atgccacagctggacatgggcgccctggataacgtcttcacggccccgacggcggctcct
tccagcatccagaaagtcaacgtcactgacagtgatgaggaggaagaagaaaaagtactc
aggaatttataa
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