Sorex fumeus (smoky shrew): 130017305
Help
Entry
130017305 CDS
T10594
Symbol
COLGALT2
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum00310
Lysine degradation
sfum00514
Other types of O-glycan biosynthesis
sfum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
130017305 (COLGALT2)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
130017305 (COLGALT2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sfum01003
]
130017305 (COLGALT2)
Enzymes [BR:
sfum01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
130017305 (COLGALT2)
Glycosyltransferases [BR:
sfum01003
]
O-Glycan biosynthesis
O-linked Gal type
130017305 (COLGALT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Aminotran_4
Motif
Other DBs
NCBI-GeneID:
130017305
NCBI-ProteinID:
XP_055963968
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MRARPAGPPALWPLLACALLGGGARGAAEPPFPESPARRPSVLVALLARNAAPALPHFLG
CLERLDYPKSRMAIWAATDHNVDNTTEILREWLRGVKSAYHYVEWRPLAEPRSYPDEIGP
KHWPSSRFTHVMKLRQAALRTAREKWSDYILFIDVDNFLTNPQTLNLLIAENKTIVAPML
ESRGLYSNFWCGITPEGFYQRTPDYVPIREWRRTGCFAVPMVHSTFLVDLRKEASDLLAF
YPPHLDYTWAFDDIMVFAFSSRQAGIQMYLCNQEHFGYLPIPLKPHQTLQEDLDSLIHVR
IEAMIDHPPMEPSQFVSETPKTPDKMGFDEIFMINLKRRKDRRDRMLRTLYEQEIAVKIV
EAVDGKALNTSQLKALSIDMLPGYRDPYSSRPLTRGEIGCFLSHYSVWKEVLARALPRSL
VIEDDVRFEHQFRRKLTRLMDDVARAGLDWELIYIGRKRMRTEEPEKTVPAVPSLVEAGY
SYWTLGYVLSLAGARKLVAAEPFGKMLPVDEFLPVMYDKHPVAEYKEHYPRRDLRAFSAE
PLLVYPTHYTGQPGYLSDTETSTIWDNETAATDWDRGHAWKGRLRGAAKNTEALRPGTAP
ARGEL
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcgcgccccgcgggacccccggccctgtggccgctgctggcctgcgcgctgctg
ggcggcggggcgcgcggggccgcggagccgccgttccccgagtcgccggcgcggagaccc
agcgtgctggtggcgctgctggcccggaacgccgcgcccgcgctgccgcacttcctgggc
tgcctggagcgcctcgactaccccaagagccggatggccatctgggcggccacggaccac
aacgtggacaacaccacagagatcctgcgtgagtggctgcgtggcgtgaagagtgcctac
cactacgtggagtggcggccactggccgagcccaggtcctaccccgacgaaatcgggccc
aagcactggcccagctcccgtttcacccacgtcatgaagctgcgtcaagccgccctgcgc
acggcgagggaaaaatggtcagactacattctgttcatagacgtcgacaacttcctcacc
aacccgcagacgctcaacctgctgatcgcagagaacaagacaatcgtggcccccatgctc
gagtcccgggggctctactccaacttctggtgtggaatcacacctgagggcttctaccag
cgcacgcccgactacgtgcccatccgggagtggcggcgcacgggctgcttcgcggtcccc
atggtccactccaccttcctggtggacctccggaaggaggcgtccgacctgctggccttc
tacccgccccaccttgactacacctgggccttcgacgacatcatggtcttcgccttctcc
agccggcaagcaggcatccagatgtatctctgcaaccaggagcacttcggctacttgccc
atccccctgaagccccaccagactctgcaggaggacctggacagcctcatccacgtgcgc
atagaagccatgatcgaccacccgcccatggagccttcccagttcgtgtcggagaccccg
aaaacccccgacaagatggggtttgacgagatcttcatgatcaaccttaagcgcaggaag
gaccgacgggaccggatgctgcggacactgtacgagcaggagatcgccgtgaagatcgtg
gaggccgtggatgggaaagcactcaacacgagtcagctgaaggcactgagcatcgacatg
ctgccaggctaccgggacccctactcctcccggcccctcacgcggggggagattggctgc
ttcctcagccactactcagtgtggaaggaggtgctggcgcgggcactgccccggagcctg
gtcatcgaggacgacgtccgcttcgagcaccagttccggaggaaactgacgaggctcatg
gacgacgtggcgcgggcggggctggactgggagctgatctacattggccggaagcgcatg
cggacggaggagcccgaaaaaacagtgcccgccgtgcccagcctggtggaggccggctac
tcctactggacactgggctacgtcctctccctggccggcgcccgcaagctggtggccgcc
gagcccttcgggaagatgctgcccgtggatgagtttctccccgtcatgtacgacaagcac
cccgtggccgagtacaaggagcactacccacggcgcgacctgcgggccttctcggcggag
ccgctgctcgtctacccgacgcactacacgggccagcccggctacctcagcgacacggag
acgtccaccatctgggacaacgagacggccgccaccgactgggaccgcggccacgcgtgg
aaggggcgtctgcggggcgccgccaagaacacggaggccctgcggcctggcactgcgccc
gcccggggcgagctctga
DBGET
integrated database retrieval system
