Sorex fumeus (smoky shrew): 130017373
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Entry
130017373 CDS
T10594
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03022
Basal transcription factors
sfum05016
Huntington disease
Brite
Transcription machinery [BR:
sfum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130017373 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
130017373 (TAF4)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
130017373 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130017373
NCBI-ProteinID:
XP_055964044
LinkDB
All DBs
Position
Unknown
AA seq
1099 aa
AA seq
DB search
MAAGSDLLDEVFFNSEVDEKVVSDLVGSLESQLAASAAPHHHLAPRAPEARAAAAAGALG
NHVGAGAGPAEGAPAAAPEPPPAGRARRGLSAGGRRPGPRPHRAAPPVPAGPAAKLSALE
AGAAPGAAAAAAAAAPAACAPGPGPAAAPAPAAAAAAAAAAAAAAAPEPAAKPAAGAAQT
LNGSAVLVNSHRAAAAPAASLLPHNGPAPPPKPGAHAATVIQTPPFLGAPAAPPAPRAPS
PPAPPAAAAAAPPAPSAAAPPPPPPPAAASLARPPGAHPAAPPAAAAAAQNGGGGGAAPP
AGSAAPAPPHAAAAAAPAPPAANSQPGPAAAAAAAAPAPGPKAESPKTAAPAAPAPAPPP
PPPPQPLAAGCAAGPGAAGMLLGPALPAAAGLPPPAPGTPTGLPKGPANAAAAAAAATPG
LPRTPSAAAAAAAGGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQLLM
IPQQALAQMQAQAHAQAQPQTPMAPRPATPTSAPPVQISTVQAPGTPIIARQVTPTTIIK
QVSQAPTTVQPAAALQRSPGVQPQLVLGGTAQTTALGTATAVQTGTPQRAVPGPTTTSAA
ATETMENVKKCKNFLSTLIKLASSGKQSTETAANVKELVQNLLDGKIEAEDFTSRLYREL
NSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQPPPASQATTALTAVVLSSSVQRTA
GKTAATVTSALQPPVISLTQPTQVGAGRPGQPAPLVIQQPPKPGTLLRPPQVTLTQTPMV
ALRQPHNRIVLTTPQHIQLNQLQPVPVVRPAALPGTKALSAVSAQAVAAQKNRLKEPAGG
SFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDETFLLPAPLQRRILEIG
KKHGITELHPDVVSYVSHATQQRLQNLVEKISETAQQKNFSYKDDDRYEQASDVRAQLKF
FEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQRDANL
TALAAIGPRKKRKVDSPGPGSGAEGSGPGSAIPGSSGVGTPRQFTRQRITRVNLRDLIFC
LENERETSHSLLLYKAFLK
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggacgaggtcttcttcaacagcgaggtggacgagaaa
gtggtgagcgacctggtgggctcgctcgagtcgcagctggcggccagcgcggccccccac
caccacctggcgccccgcgcgcccgaggcgcgggccgcggccgccgccggcgcgctcggg
aaccatgttggagccggagccgggccggccgagggcgcgcccgcagcggcgccggagccg
ccccccgcaggtagagcgcggcgcggcctgagcgcgggcgggcggcgcccgggcccgcgt
cctcaccgcgccgccccgcctgtccccgcagggcccgccgcgaagctgagcgcgctcgag
gccggcgcggcgcccggggcggcggcggcggcggcggcggcggcgcccgcggcctgcgcg
cccgggcccgggcccgcggccgctcccgctcccgccgccgccgccgccgccgccgccgcc
gccgccgccgccgccgcgcccgagcccgccgccaagcccgccgcgggcgccgcgcaaact
ttgaatgggagcgccgtgctggtgaactcgcaccgcgccgccgccgcacctgccgccagc
ctgctgccgcacaacgggcccgcgccgccgcccaagcccggcgcccacgccgccactgtc
atccagacgccgcccttcctcggcgcccccgccgcgccgcccgcgccccgcgcgccctcg
ccgcccgcgccccccgccgccgccgccgccgcgccccccgcgcccagcgccgccgcgccg
ccgccgccgccgccgcccgccgccgccagcctggcccggccgcccggcgcccacccggcc
gcgcccccggcggcggcggcggcggcccagaacggcggcggcggcggcgccgcgcccccc
gcgggcagcgccgcccccgcgccgccccacgccgcggccgccgcggcccccgcgcccccc
gccgccaacagccagcccggcccggccgccgccgccgccgccgccgcgcccgcgccgggg
cccaaggccgagtcgcccaagacggccgcgcccgccgcgcccgcgcccgcgcccccgccg
ccgcccccgccgcagcccctggcggccggctgtgcggccgggccgggcgccgccggcatg
ctgctggggcccgcgctgcccgccgccgccggcctcccgccgcccgcgcccggcaccccc
accgggctgcccaagggcccggccaacgccgccgccgccgccgccgccgcgacccccggc
ctgccccggacgccctcggccgccgccgccgccgccgccggcgggatccgggccacgctc
acgcccaccgtcctcgccccgcgcctgccgcagccgccgcagaaccccaccaacatccag
aacttccagctgccgccaggcatggtcctcgtgcggagcgagaacgggcagttgctcatg
atcccccagcaggccttggcccagatgcaggcgcaggcccacgcgcaggcccagccgcag
acccccatggcaccccgccctgcgacccccaccagtgccccccccgtgcagatctccacg
gtgcaggcacctgggacccccatcattgcgcgtcaggtgacccccacaaccatcatcaag
caagtgtctcaggccccgacgacggtgcagcccgccgccgcattgcagcgctcccctggc
gtgcagcctcagctggtcttgggtggcaccgcccagaccacggcactcgggacagccaca
gccgtgcagacggggacccctcagcgagccgtgccagggcccaccaccacctctgcagct
gccacagagacgatggagaacgtgaagaagtgtaagaacttcctgtcgacgctgatcaag
ctggcgtcgtctggaaaacagtccacggagacggccgccaacgtgaaggagcttgtgcag
aacttgctggatgggaagatcgaagccgaggatttcacgagtcggttataccgggaactt
aattcttcacctcaaccttaccttgtgcctttcctgaagaggagcttgcccgccttgaga
cagctgacgcccgactccgcggccttcatccagcagagccagcagcagccgccgcccgcc
tcgcaggccaccacggccctcacggccgtggtgctcagcagctcggtgcagcgcacggcc
gggaagacggcggccaccgtgaccagtgccctgcagcctcccgtcatcagcctcacgcag
cccacacaggtgggcgctggcaggcccgggcagcctgcaccgctggtgatccagcagccg
ccgaagccggggacgctgctccggcccccccaggtgaccttgacgcagacgcccatggtc
gcgctccggcagccccacaaccgcatcgtgctcacgacgccccagcacatccagctgaac
cagctgcagccagtccccgtggtgaggcctgcagcgctgcctggaaccaaagccctttct
gcggtctcggcccaagcagtggcggcgcagaagaacagactcaaggagcccgcgggcggc
tctttccgggacgatgatgacatcaacgatgtcgcatcgatggctggagtcaacctgtcg
gaagagagtgctcggatcctggccaccaactcggagctggtgggcaccctcactcggtcg
tgcaaggacgagaccttcctgctgccggcgccgctgcagagacggatcttggagatcggt
aagaagcacggcatcacggagctgcacccggacgtggtgagctacgtgtctcacgccacg
cagcagaggctccagaacctggtggagaagatctcggagacggcgcagcagaagaacttc
tcctacaaggacgacgaccgatacgagcaggccagtgacgtccgggctcagctcaagttc
ttcgaacagctcgatcagattgagaaacagaggaaagacgagcaggagagagagatcctg
atgcgagcagccaagtctcgatccagacaggaagatccggagcagttaaggttgaagcag
aaagcgaaagagatgcagcaacaggagctggcacagatgcggcagcgcgatgccaacctc
acggcactggcggccattgggccgaggaagaagaggaaagtggactccccgggcccgggg
tcgggagcagagggctcgggccccggctccgccatcccaggcagctccggcgtcggaacc
cccagacagttcacgcgacaaaggatcacgcgggtcaacctcagggacctcatattctgc
ttagaaaacgagcgtgagacaagccattcgctgctgctctacaaagcattcctcaagtag
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