Sorex fumeus (smoky shrew): 130017386
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Entry
130017386 CDS
T10594
Symbol
STX16
Name
(RefSeq) syntaxin-16 isoform X1
KO
K08489
syntaxin 16
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
130017386 (STX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfum04131
]
130017386 (STX16)
Membrane trafficking [BR:
sfum04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
130017386 (STX16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
ATG17_like
Syntaxin_2
MCPsignal
Syntaxin
ATRIP_mid
DUF5345
DUF6548
GM130_C
HR1_TOCA
Orf78
DUF2116
TRP
Use1
EVI2A
MSC_0620_UU052
Motif
Other DBs
NCBI-GeneID:
130017386
NCBI-ProteinID:
XP_055964057
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MATRRLTDAFLLLRNNCIQSRQLLAEQVSSHSSCRPPRARSRAALADDRMALVSGISLDP
EAAIGVTKRSPPKWVDGVDEIQYDIGRIKQKMKELASLHDQHVNRPTLDDSSEQEHAIEI
TTQEITQLFHRCQRAVQALPGRARRGCSPQEERLLRNVVTSLAQALQELSTGFRHAQSGY
LKRMRNREECSQQFFDTSVPLMDDGEADTLYGRGFTDDQLLLVEQNTLMVEEREREIRQI
VQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGLKQLHKAEQYQKKNRKML
VILILFVIVVVLIVILIGVKSR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggccacccggcgcctgaccgacgccttcttgctgctgcggaacaactgcatccagagc
cggcagctgctggccgagcaagtgagtagtcacagctcctgccgccctccgcgcgcacgc
agccgcgccgcgctcgccgatgaccgtatggccctggtgtcaggcattagcctggaccca
gaggcagcgattggagtgacgaaacggtcgcccccgaagtgggtggatggcgtggacgaa
atccagtatgacatcggccggatcaagcagaagatgaaggagctggccagtctgcacgac
cagcacgtgaacaggcccacgctggacgacagcagcgagcaggaacacgccatcgagatc
acgacccaggagatcacccagctcttccacaggtgccagcgcgcggtgcaggcgctgccg
ggccgggcccgccggggctgctcgccgcaggaggagcggctccttcggaacgtggtcacc
tccctggcgcaggccctgcaggagctgtccaccggcttccggcacgcgcagtcgggctac
ctcaaacgcatgaggaaccgcgaggagtgctcccagcagttcttcgacacgtcggtgcca
ctgatggatgacggcgaggccgacacgctgtacggccggggcttcaccgacgatcagctg
ttgctggtggagcagaacacgctgatggtggaggagcgggagcgggagattcgccagatc
gtccagtccatctcggacctcaacgagatcttccgggacctgggcgccatgatcgtggag
cagggcacagtcctggacaggatcgactacaacgtcgagcagtcgtgtatcaaaaccgaa
gacggcctgaaacagcttcacaaggcggaacagtatcagaagaagaaccgcaagatgctg
gtgattctgatcctgtttgtcatcgtcgtcgtcctcatcgtcatcctcatcggcgtgaag
tcccgctaa
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integrated database retrieval system