Sorex fumeus (smoky shrew): 130017415 Help Entry 130017415         CDS       T10594                                  Symbol COL14A1 Name (RefSeq) collagen alpha-1(XIV) chain   KO K08133   collagen type XIV alpha Organism sfum  Sorex fumeus (smoky shrew) Pathway sfum04974   Protein digestion and absorption Brite KEGG Orthology (KO) [BR:sfum00001]  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     130017415 (COL14A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:sfum00535]     130017415 (COL14A1) Proteoglycans [BR:sfum00535]  Extracellular matrix (ECM) proteoglycans   Others    130017415 (COL14A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  VWA fn3 Collagen VWA_2 Pur_ac_phosph_N Ig_DSCAM-DSCAML_C Fn3_VIN3 VWA_3 vWA_SIBA-E Motif Other DBs NCBI-GeneID:  130017415 NCBI-ProteinID:  XP_055964137 LinkDB All DBs Position Unknown AA seq 1796 aa AA seqDB search MKIFQGRMQHWLIPAFLTIAHFCTIVQSQVSPPTRLRYNVLSSDSIQISWKAPRGKFGGY KLLVTPASGGKTNQLNLQNTATKAIIQGLMPDQNYTVQLIAYNKDKESKPAQGQFRINDL EKRKDPKPRVKIVDRGNGSKQFSPEEVKFFCETSAIADIVILVDGSWSIGRFNFRLVRLF LENLVTAFNVGSEKTRIGLAQYSGDPRIEWHLNAFSTKDEVIEAVRNLPYKGGNTLTGLA LNYIFENSFKPEAGARMGVSKIGILITDGKSQDDIIPPSRNLRESGVELFAIGVKNADES ELQEIASEPDSTHVYNVAEFDLMHTVVESLTRTVCSRVEEQDKEIKASALIPTGPPTELI ISEVTARSFMVNWTHAPGKVQKYRVVYHPTRGGKPDEVVVDGSVSSTVLKGLMSLTEYQV AVFAVYAHTASEALRGSETTLALPMASNLQLYDVTENSLKASWDAVAGASGYLILYAPLT EDLAGDEKEVKVGEAHTNVELGGLLPNTEYTVTVYAMFGEEASDPVSGQETTLPLSPPRN LRVSNVGSNSARLAWDPTSRKITGYRIVYNNEDGTEINEVEVDPITTFPLKGLTPLTEYT VAIFSMYEEGQSEPLTGVFTTEEVPAQQYLEIDEVKTDSFRVTWHPLSADEGQHKLMWIP AYGGKTEEVILKEDQDSHVIEGLDPGTEYEVSLLAIMDDGSESEVVTAVGTTLDSDWTES ATTIAPTRPVTTVFRTGIRNLVVDEETTSSLRVKWDISDSSVEQFRVTYLTAQGDPAEEV VGMVMVPGSENHLLLKPLLPNMEYKVTVTPIYHDGEGVSVSAPGKTLSPSGPQNLRVSEE WYNRLRITWDPPSSPVKGYRIVYKPVSVAGPTLETFVGADINTILITNLLSGMDYNVKIF ASQASGLSDALTGVVKTMFLGVTNLQAEEIEMTSLCAQWQVHRHATSYRIMIESLQDTQK QESTVGGGTNRHCFYGLQPDSEYKISVYTKLQDIEGPSVSIMEKTQSPPTQPPTSPPTIP PAKEVCRTAKADLVFMVDGSWSIGDDNFNKIINFLYSTVGALNKIGADGTQVAMVQFTDD PRTEFKLDSYKTKETLLEAIKHIAYKGGNTKTGQAMKYVRDTLFTTEAGTRRGTPKVIVV ITDGRSQDDVNKISREMQSEGYSIFAIGVADADYSELVSIGSKPSSRHVFFVDDFDAFKK IEDELITFVCETASATCPLVHMNGIDLAGFKMMEMFGLIEKDFSSVEGVSMEPGTFNVFS CYRLHKDALVSQPTKYLHPEGLPSDYTISFLFRILPDTPEEPFALWEILNKNSDPLVGVI LDNGGKTLTYFNYDYSGDFQTVTFEGPEIQKIFYGSFHKLHIVISKTLAKVVIDCKQVGE KAINASANITSDGIEVLGKMVRSRGPTGNSAPFQLQMFDIVCSTSWANRDKCCELPGLRD DETCPDLPHSCSCSEASKGTLGPAGPPGGPGVRGPKGQRGEQGPKGPEGPRGTIGPQGPQ GPPGPQGPSGLSIQGMPGMPGKKGDKGETGLPGPQGVPGGVGSPGRDGSPGQRGFPGKEG SSGPPGPPGPIGIPGAPGIPGITGSVGPQGSLGPPGVPGPKGERGERGDLQSQAMVRAVA RQVCEQLIQSHMARYTAILNQIPSHVTSIRTVQGPPGEPGRPGSPGTPGEQGPPGTPGFP GNAGVPGTPGERGLTGLKGEKGNPGIGSQGPRGPPGPTGPSGESRPGSPGPPGSPGPRGP PGHLGIPGPQGPSGQPGYCDPSSCSSYGVGAPHPDQPEFTPVQDELEAMELWGPEN NT seq 5391 nt NT seq  +upstreamnt  +downstreamnt atgaagatcttccagggcaggatgcagcactggctgattccagcttttttgacaattgct cacttttgtaccattgtccagagtcaagtgtctccgccaacacggttaagatataatgta ttatcatctgatagtatacagatttcatggaaggctccacgaggaaaatttggtggttac aaacttcttgtgactccagcttcaggtggaaaaaccaatcagttgaatctgcagaacacc gcaactaaagcaattatacaagggctcatgccagaccagaattacacagttcaacttatt gcatacaataaagataaggaaagcaagccagctcaggggcaattcagaattaatgattta gaaaaaagaaaggatccaaagcccagagtcaagattgtggacagaggaaatgggagtaaa cagttttcacctgaagaagtgaaatttttctgtgaaacttcagctattgctgatattgta atcctggtggatgggtcttggagtattggaagattcaacttcagactggttcgacttttc ttggaaaacctggtaacagcattcaacgtgggctcagagaagacacggattggtcttgcg caatacagtggtgaccccagaattgaatggcacttgaatgcctttagcacaaaagatgag gtgattgaagctgtccgaaatttaccatacaagggaggaaatacacttacaggtcttgct ttgaactacatttttgaaaatagctttaagccagaagcaggggcaagaatgggagtatcc aaaattggcattttaatcacagatggaaagtcccaagatgatattattcctccatccaga aacctccgtgagtctggtgtagaactatttgccataggagttaaaaacgcagatgagagc gagctgcaggagatcgcctcagagccagacagcacccacgtgtacaacgtggctgagttc gacctcatgcacacagtggtggagagcctgacccggactgtgtgctccagggtggaagaa caggacaaggagatcaaagcctcagcgcttatacccactggaccacctacagagctgatt atttctgaagtcactgccagaagctttatggttaactggacccatgccccaggaaaagtg caaaaatatagagttgtatatcatcctaccaggggtggaaaaccagacgaggtggtggtg gatgggagtgtgtcctccacagtgttgaagggcttgatgtcattaactgagtatcaggta gctgtctttgccgtctatgcccataccgctagtgaagccctacggggaagtgaaactaca cttgctttacccatggcttccaacctccagctgtatgatgtaactgagaacagtctgaag gccagctgggatgcagtggccggggcatctggctacctcatcctctatgcgcctctcacg gaggatctggctggagatgaaaaagaggtgaaggttggagaggcccacacaaacgttgaa ttgggtgggttattgcccaatacagaatatacagtcacagtttatgctatgtttggagaa gaagccagcgatcctgtttctggacaagaaacaacattgcccttaagtccaccacgaaac cttagagtctccaatgttggctcgaacagtgctcggttagcctgggacccaacttcaagg aagattactggttatcgaattgtttacaacaacgaggatgggactgaaatcaatgaggtt gaagttgaccccattactacattccccctgaaaggcctcactcccctcacagagtacacg gtcgccattttctccatgtatgaggaaggacagtcagagcctctgaccggggttttcacc acagaggaagttccagcccagcaatacttggaaattgatgaggtgaagacagacagtttt agagtgacctggcatcccctgtctgctgatgaagggcaacacaagttgatgtggattcct gcatacggtgggaagacggaagaggttatcttaaaagaagatcaagactctcatgttatt gaaggtctggatcctggcactgaatatgaagtttcgcttttggccataatggatgatgga agtgaaagtgaggtggtaactgctgtcgggactacacttgacagtgactggacagaatca gccaccaccatagcacctaccaggcccgtgactacagttttccggacaggaatcaggaac ctggttgtagatgaggaaaccacttcaagcctgcgggtgaagtgggacatttccgacagc agcgtggagcagttccgagtgacctacctgacggctcaaggggatcctgcagaagaagtg gtaggaatggttatggtgcctggaagcgagaaccatctccttctgaagcctttgctgcct aacatggagtataaggtcactgtgactcccatctaccatgacggagaaggcgtcagtgtc tctgcaccaggaaaaaccttgtcaccttctggtccccaaaacttgcgcgtttcagaagaa tggtataacaggctacgcatcacgtgggatcccccatcctctcctgtaaagggctatagg attgtttacaaacccgtcagtgtggctggcccaaccctggaaacgttcgtgggagccgac attaacaccattcttatcacaaacctcctcagtggcatggactacaatgtgaaaatattt gcctcccaggcctcaggcctcagcgatgctctgacaggcgtggtgaaaacaatgtttttg ggtgtaaccaaccttcaagcagaagagattgaaatgaccagcctgtgtgctcagtggcag gtgcatcgtcatgctacttcctacagaatcatgatagaatcacttcaagatacacaaaag caagaatctactgtgggtggagggacaaaccgacattgcttctatggacttcaacctgat tcagaatataaaatcagtgtttacacaaagctccaggacattgaggggcccagcgtgagc atcatggaaaaaacacaatcacctcctactcagccacctacttctcctccaaccattcca ccagcaaaagaagtatgtagaactgccaaagctgacctggtgtttatggtggatggatcc tggagtattggagatgacaacttcaacaagatcattaactttctgtatagcactgttgga gccctgaacaagattggtgctgatggaacccaagttgcaatggttcagttcactgatgac cccaggacagaatttaaactagattcttacaaaaccaaagagactcttctagaggcaatt aaacatatcgcgtacaaaggaggaaatacaaagacaggacaagccatgaagtatgtccgg gacaccttgtttactacagaggccgggactagaagaggcacccccaaagtcattgtggtg ataactgacgggaggtctcaggatgatgtgaataaaatctccagggagatgcagtcagag ggttacagcatttttgccattggtgtggctgatgccgattattctgagttggttagcatt ggcagcaagcccagttcccgccacgtcttctttgtggatgactttgatgcctttaagaaa attgaagatgagctgattacttttgtctgtgaaaccgcatcagcaacctgccccctggta cacatgaatggcattgatcttgcaggttttaagatgatggaaatgtttggtttaattgaa aaggacttttcatcagtggaaggggtgtctatggagcctggcaccttcaatgtgttttcc tgttaccgacttcataaagatgccttagtttcccagccaactaagtatttgcatccagaa ggattgccatctgattatacgatcagttttctattccgaattcttcctgacactccagag gaaccatttgctctttgggaaattttaaataaaaattctgacccattggttggggtcatt ttagataatggtgggaaaaccctaacgtattttaactacgactacagtggagattttcag actgtaacttttgaaggacctgaaatccagaaaattttctatggaagctttcacaagcta catattgttataagcaagactttggcaaaagtggttattgactgcaagcaagtgggtgag aaggcaataaatgcatcagctaatatcacctctgatggtatagaagtccttgggaaaatg gttagatcaagaggacccaccgggaactctgcaccgttccagttacagatgtttgacatt gtttgctccacatcatgggccaatagagacaaatgctgtgaactcccaggcctgagggac gatgaaacctgcccagaccttccccattcctgctcttgctctgaagccagcaaagggact ctgggaccagcaggcccaccgggtggcccaggagtccgaggaccaaagggccagcgtggt gaacagggcccaaagggaccagaaggccctcgtggaactataggcccccaaggacctcag ggtccccctggaccccaaggaccaagtggtttgtctatacaaggaatgcctggaatgcca ggcaaaaaaggagataaaggagagactggccttcctggcccacagggggttccgggaggt gttgggtcccctggacgtgacggctcaccaggccaaaggggctttccaggaaaggaagga tcttctggccctccaggcccaccagggccaattggcattcctggagctcctggaatcccc gggatcacaggaagtgtgggtccccaaggctccctgggaccacctggggtcccggggcca aagggagaaaggggggaacggggggacctgcagtctcaagccatggtgagagcagtggct cgccaggtgtgcgaacagcttatccagagtcacatggccaggtacacagccatcctcaac cagattcccagccacgtcacctccatccgcacagttcaagggcctcctggtgagcctgga agacctgggtcaccgggaactcccggagagcaaggacctccaggcaccccaggttttcca ggaaatgctggtgtgccagggaccccaggagaacgaggtctaaccggactcaaaggagaa aaaggaaatcctggtattggatcccaaggcccaagaggtccccctggaccaacaggacca tcaggcgagagtcgacctggaagccctgggcctcctggttctcctggaccaaggggacca ccaggccacctgggcatacctggaccccaaggtccttctggccaacctggttactgtgat ccttcttcatgttcttcctatggagtaggagctccccatcctgatcagccagaatttacg cctgttcaagatgagctggaagccatggaactgtggggtccagagaactga

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