Sorex fumeus (smoky shrew): 130017499
Help
Entry
130017499 CDS
T10594
Symbol
COL26A1
Name
(RefSeq) collagen alpha-1(XXVI) chain isoform X1
KO
K24358
collagen type XXVI alpha (EMI domain-containing protein 2)
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
130017499 (COL26A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sfum04990
]
130017499 (COL26A1)
Domain-containing proteins not elsewhere classified [BR:
sfum04990
]
C1q domain-containing proteins
Emilin / mutimerin group proteins
130017499 (COL26A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMI
Collagen
Motif
Other DBs
NCBI-GeneID:
130017499
NCBI-ProteinID:
XP_055964171
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MKLALLLPWACCCLCGSALATGFLYPFPAASLQQHGYPEPGAGSPGSGYGGRRHWCHHTV
TRTVSCQVQNGSETVVQRVYQSCRWPGPCANLVSYRTLIRPTYRVSYRTVTALEWRCCPG
FTGSNCEEECMNCTRLRDMSQRLSTLEAKVILLEAAAPPSGPDNDLPAPQGSPPPWNEDF
LPDAIPLAQPRRRPTGPAGPPGQTGAPGPAGPPGSKGDRGQAGEKGPAGPPGLLGPPGPR
GLPGEMGRPGPPGPPGPAGSPHGVLYSLQPADKANADTQLASAAVDTVLAGVPGPRGPPG
PPGPPGPHGPPGPPGAPGSQGPAAEQSVTALAGEPGTKGEEEEKAAAEGEGVQQLREALK
ILAERVLILEHMIGIHDPLASPDGGSGQDAALRAGLKTKRGGPTPDGSLAALLGSEPGQK
RVRGSE
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggcgctgctgctgccctgggcgtgctgctgcctgtgcgggtcggcgctggcc
accggcttcctgtaccccttcccggccgcgtcgctgcagcagcacggctaccccgagccc
ggcgccggctccccgggcagcggctacgggggccgccggcactggtgccatcacacggtg
acaaggaccgtgtcctgccaggtgcagaacggctcggagacagtcgtccagcgcgtgtac
cagagctgccggtggccggggccctgtgccaacctcgtgagttacaggactctcatcaga
cccacttacagagtatcctaccggacggtgacggcactagagtggcggtgctgccctggc
tttaccgggagcaactgcgaggaggaatgcatgaactgcacccgcctcagggacatgagc
cagaggctgagcacactggaggccaaggtgatcctgctggaggcagccgctccaccctcg
ggccctgacaacgacctgccggccccgcagggcagccccccgccctggaacgaggacttc
ctccccgacgccatccccctggcacagccccgcaggaggcccacgggcccggcagggccc
cccgggcagacaggagctccagggcctgctggtccccccggctccaagggggatcggggc
caggcgggggagaaaggccccgcggggccaccaggcctcttggggccacctgggccccgc
ggacttcctggggagatggggcgccccgggccccctggcccccctggccccgcgggcagc
ccccacggtgtcctctactccctgcagccggcggacaaggccaatgcagacacacagctg
gcctcggccgccgtggacacggtgctggcaggggtcccggggccccggggccccccaggt
ccgccaggtccccccggcccacacggacccccaggaccccctggggcgcccgggtcccag
ggcccggctgcagagcaaagcgtgacggccctggctggggagcctggcacgaaaggggag
gaagaggagaaggcggctgcagagggtgagggagtgcagcagctacgggaggcactgaag
atcctggcggagcgagtactgatcctggagcacatgatcgggatccacgaccccctggcc
tctccggacggcggctctggccaggacgcggccctgcgtgccggcctcaagacaaagcgc
ggcggcccgacccctgacggctccctggcggccctgctgggctccgagcctgggcagaag
cgcgtgcgtgggtccgagtga
DBGET
integrated database retrieval system
