Sorex fumeus (smoky shrew): 130017555
Help
Entry
130017555 CDS
T10594
Symbol
POM121C
Name
(RefSeq) nuclear envelope pore membrane protein POM 121C isoform X1
KO
K14316
nuclear pore complex protein Nup121
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03013
Nucleocytoplasmic transport
sfum05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130017555 (POM121C)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
130017555 (POM121C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfum03019
]
130017555 (POM121C)
Messenger RNA biogenesis [BR:
sfum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130017555 (POM121C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
130017555
NCBI-ProteinID:
XP_055964228
LinkDB
All DBs
Position
Unknown
AA seq
1206 aa
AA seq
DB search
MSPAAAAAAAGGGERRRPPLASSRDGRGRGCGGTAGAALAGLCLLGLALYLVPALAALAW
LAVGSTAAWWGLSGEPRAPRACPPARPARRPRAPLAQATANGSLLEPRSLLEGPDRAELL
LMGSYLGKPGPPPPPAPAAAAEARELRERPGRRPPTRPAPPAPPAARAPHLLPSRPSPLR
PARRLSPRESGTLSNRFVITPRRHYPIQQAQYSLLGVLPTVCWNGYHKKTVLSPRNSKMV
CSPVTVRIAPPDSKLARSSLPEQVISSPLSSPPSNTPDPCAKETVLNALRERKKRTVEEE
DHIFTEGQENKRRRHDSSGSGHSAFEPLVANGVPAAFVPKPGSLKRGLVAQSADDHLNKR
SRTSSLSSLASTCTGGIPSSSRNAITSSYSSTRGHAQLWKRTGPSSSPFSSPASSRSQTP
ERPAKKMREEELTQPSTSTPLVTDKESQGEKVADPASSKKQSSFSSPTTPGGSGQRKRKI
QLLPSRRGDQLTLPPPPQLGYSVTAEDLDLEKKASLQWFNKVLEDQTDIAPGSVPENPPA
PVPVPAFSLKPPAAEAAPPAAPLPEPSASANPNPLLESLKKMQASPGPPSSSSGAATVAT
SEAPSPPKTLSLLAPLAVPPPAPLPSTSEDSKPSVTFLGLTPTSSTIPITETTKTPAASP
AETTAPSPAPKPSILLGMLSTPPSNPPASVAPGVSPAPVFKPIFETPPKSEVGGPLPTSP
SKAAPTAPAAPAASSGSAPPTTTASSSPAFKPIFDSLGQPPSAPLLTPFSFVPTPAATSA
SAPTSASVPLFTGQASAASSAVTVATASTTTATATKPLFGFTVGTVTSVANSTSATATST
AASSSQPFLFGTPATSGTGFPPALGSIFQFGQSPAVTPATTAATFGQSLPSATPSSGSSS
FTGFGSALSTAPAVATSSAAPTTFNIPFGSGTKAPLPSYPAANPQPTFGATDGTSQGAAK
PALAPSFGSSFTFGNSAAPAPTAAPAPAQPTFDSSTQYTFGGLKPTGSTFGTAATTQPAF
GSTTSVFSFGTATTQTPSSGASSSLFGSTAPSPFTFGGSAAPAATGGFGLSVANAGTSST
SGAFNFGTGQSGTTTGTAPFGGGLSQNPLAAPAQSTPFAFSVPSAPENKPVFGGTSTPTF
GQSNPGSGVGAAGSSLPFGASSTPAQGFVGVGPFGSTAPSFSIGAGSKTPGARQRLQARR
QHTRKK
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgtctccggcggcggcggcggcggcggctggcggaggcgagcggcggcggccccccttg
gcgagcagccgggacggccggggccggggctgcggcggcacggcgggagcggcgctcgcc
ggcctgtgtctgctgggcctcgcgctgtacctggtgccggcgctggccgcgctggcctgg
ctggccgtggggtcgaccgcggcctggtggggactgagcggcgagccccgcgccccgcgc
gcctgcccgcccgcccgccccgcgcggcgcccgcgggccccgctcgcccaggccacggcc
aacggcagcctgctggagccgcggagcctcctcgagggccccgaccgcgccgagctgctg
ctcatgggcagctacctgggcaagccggggcccccgccgccgcccgcgcccgccgccgcc
gccgaggcccgggagctgcgggagcggccgggccgccgccccccgacgcgccccgcgccg
cccgcgcccccggccgcccgcgccccgcacctcctgccctcccggccctcgccgctccgg
cccgcccgccggctctcgccccgggagagcgggactttatcaaatcgatttgtaattaca
cctcgaagacactatccaatccagcaggcccagtactccttactgggggtcctgcccaca
gtgtgctggaatggttatcacaagaagaccgtgctctcccctcggaattccaaaatggtg
tgcagccccgtcacggtgaggattgcacctcctgacagcaagctggcccggtcctcgcta
ccagagcaggtcatcagctcgccactgtcctctccgccaagtaatactccagacccgtgt
gcaaaggagactgtactgaatgctctcagagagaggaaaaaaaggaccgtggaggaggaa
gatcatatattcaccgagggccaggaaaacaaaagaaggcgccacgatagcagcgggagt
ggccattcggccttcgagcctctggtagccaatggagtccccgccgcattcgtgcctaag
ccggggtctctgaagcgcggcctcgtggcacagagcgcggatgaccacctgaacaagcgc
tcccgcacgtcgtcgctgagctccctggcgagcacctgcacgggcggcatccccagctcc
agccgcaacgccatcaccagctcctacagctccacccgcggccacgcgcagttatggaag
aggacagggcccagctcgtcacccttctccagcccggcctcgtcacgctcccagacccca
gagaggccagccaaaaagatgagagaagaggaactgacccagccgtctacttcaactccg
ctggtcacagacaaggagtcccagggagaaaaagttgcagacccggcctcttccaagaaa
cagagctcgttcagctcccccacgacgcccggcggctccgggcagcggaagcggaagatc
cagctgctgccctccagacgaggggaccagctgacgttgcccccgccaccccagctcggt
tactcagtcactgccgaggacctggacctggagaagaaagcttctctgcagtggtttaac
aaggtcttggaggaccagacggacatagccccgggctctgtccctgaaaacccgcccgcg
cccgtgcccgtgcccgctttctccctgaagccacccgcagctgaggctgctccccctgcg
gccccactaccagagcccagcgccagcgcaaacccgaacccgctgctggagagcctgaag
aagatgcaggcttccccgggaccgccctcatcctcctcaggggctgccactgtggccacc
tcggaggccccctcgcctccgaagacactcagtctcctggccccgctcgctgtgccccca
ccagcacccctcccaagcacctctgaagactccaagccctcggtcactttcttggggctg
accccgacttcctccacaatccccatcactgagaccaccaagacccctgcggcctctccg
gccgagaccactgccccctccccggcccccaagccaagcattctcttggggatgctgagc
accccgccctccaatcctcccgcttctgtcgctcctggggtgtctccggctcccgtgttc
aagcccatttttgagacccccccaaaaagcgaagtgggaggccccttgcccacaagccca
tccaaggcggccccgacggctccggcggctcctgcagcttcttccggttctgcgcccccc
acaaccaccgcctcctcgtcccccgctttcaagcccatcttcgacagcttggggcagcct
ccatccgcgcccttgctgacgcccttctccttcgtgcccacccccgccgccaccagcgcc
agcgcccccaccagcgccagcgtccccctcttcacaggccaggccagtgccgcctcctcg
gcggtgactgtggccacagccagcaccacgacggccacggccacaaagcctttgttcggc
ttcactgtgggcacagtgaccagcgtggcgaatagcacaagcgccaccgcaaccagcacc
gcagcctcttcctcccagcctttcctcttcgggacgcccgctacctccggcaccggcttc
ccccctgccctgggctccatattccagtttggccagtccccggctgtgacccccgccacc
acggctgctaccttcggccagtccctgcccagtgccactccaagtagcggcagctccagc
ttcacggggttcggcagcgccctgagcacagccccggctgtggccaccagcagtgccgcg
cccaccaccttcaacattccctttggctccggcaccaaggcccccctcccgtcgtacccc
gcggccaaccctcagcccacttttggggccactgacgggacatcccaaggggcagccaag
ccagccctggccccaagcttcggcagctctttcacttttgggaactctgcagcccccgcc
cccacggcagcccctgctcccgcccagcccaccttcgacagttccacccagtatactttt
ggtggcctcaagcccacaggctctaccttcggcaccgctgccaccacccagccggccttt
ggcagcaccacctctgtcttctcgttcggcaccgccaccacccagacccccagcagtgga
gccagcagctcgctgttcggcagcacggcgccgtcacccttcacgttcgggggctcagca
gccccggcggccactgggggtttcgggcttagtgtggccaatgctggtaccagctccact
tcgggggcgttcaactttggaacgggacagagcgggaccaccaccggcactgcccctttt
gggggaggcctgagccagaaccccttggccgcacccgcccagagcacaccctttgccttc
agcgtgccgagcgcgcccgagaacaagcctgtgtttggagggacctccacacccaccttt
ggtcagagcaaccctggctctggggtgggtgcagcgggcagcagcctcccttttggggcg
tcctcaacacctgcccaaggcttcgttggagttggacccttcggatcaacagccccttcc
ttctccatcggtgcgggatccaagaccccaggggctcgacagcggctgcaggcccgaagg
cagcacacgcgcaaaaagtag
DBGET
integrated database retrieval system
