Sorex fumeus (smoky shrew): 130017569
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Entry
130017569 CDS
T10594
Symbol
HIP1
Name
(RefSeq) huntingtin-interacting protein 1
KO
K04559
huntingtin interacting protein 1
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum05016
Huntington disease
sfum05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
130017569 (HIP1)
05022 Pathways of neurodegeneration - multiple diseases
130017569 (HIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfum04131
]
130017569 (HIP1)
Membrane trafficking [BR:
sfum04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
130017569 (HIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ANTH
I_LWEQ
HIP1_clath_bdg
Filament
CLZ
Pox_A_type_inc
Motif
Other DBs
NCBI-GeneID:
130017569
NCBI-ProteinID:
XP_055964243
LinkDB
All DBs
Position
Unknown
AA seq
1038 aa
AA seq
DB search
MDRMASSIKQVPNPLPKVLSRRAVGAGVEAAERESFERTQSVSINKAINTQEVAVKEKHA
RTCILGTHHEKGAQTFWSVVSRLPLSSNAVLCWKFCHVFHKLLRDGHPNVLKDSLRYKNE
LSDMSRMWGHLSEGYGQLCSIYLKLLRTKIEYHTKNPRFPGNLQLSDRQLDEAGESDVNN
FFQLTVEMFDYLECELNLFQTVFNSLDMSRSVSVTTAGQCRLAPLIQVILDCSHLYDYTV
KLLFKLHSCLPADTLQGHRGRFLEQFTKLKDLFYRSSNLQYFKRLLQIPQLPENPPNFLR
ASALSEHVSPVVVIPAEASSPDSEPVLEKDDLMDKDASRQNVFDNKFDDVFGSPFSSDPF
NFNSQNGVNKDEKDHLIGQLYREISSLKGQLESLKAEGQRTVLQLKGRISELEAELAEQR
HLRQQAVDDGEFLRAELDELKKQREDTEKAQRSLTEIERKAQANEQRYSKLKEKYSELVQ
NHADLLRKNAEVTKQVSVARQLQADVEREKQELQEGLQRLTEQAQRKTQEQTEVLESLKQ
ELSSSRQELQALQSNLQESAQAESKWTAQIADLKMERDTLLVTASQKEEELHALREELKQ
TQLQLANAQDSLSQVARDQRKKLLAESKKAAEQVIQDALRQLEEPEVAGSCGTADHLLAK
TKSVSNCIEQLEKSRSQFLSCPDDISAFLQSVTLLAHLTSDTVIHGSCTSLHAPQEPADS
LTEACRQYAMETLIYLAYLDGEGTLANADSTAMQTCLSRISAISEELLSKGQDIVQEELG
DLVDKEMAATAAAIETATARIEEMLSKAREGDTGAKLEVNERILGSCTNLMQAIRVLIVA
SKDLQREIVESGRGTASSKEFYAKNSRWTEGLISASKAVGWGATVMVDAADMVVQGKGKF
EELMVCSREIAASTAQLVAASKVKADKDSPNLAQLQLASRGVNQATAQVVASTISGKSQI
EQSAEDMDFSSMTLTQIKRQEMDSQVRVLELETELQKERQKLGELRKKHYELAGVAEGWD
EENEASAPSPQAAVPEHE
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggaccggatggccagctccataaagcaggtgcccaacccactgcccaaggtgctgagc
cggcgcgcggtcggcgcgggcgtggaggcggctgagcgggagagcttcgagaggactcag
agcgtcagcatcaataaggccattaatacgcaggaagtggccgtgaaggaaaagcacgcc
cggacgtgcatcctgggcacccaccacgagaagggggcgcagaccttctggtccgtggtc
agccggctgcccctgtccagcaatgccgtgctctgctggaagttctgccacgtgttccac
aagctgcttcgcgatggacaccccaatgtcctgaaggactcgctgcgctacaagaatgag
ctgagcgacatgagcaggatgtggggccacctgagtgagggctatggccagttgtgcagc
atctacctcaaactactgagaacgaagatcgagtaccacaccaagaaccccaggttccca
ggcaaccttcagctgagtgaccggcagctggacgaggccggggagagtgatgtcaacaac
tttttccagctgacggtggagatgttcgactacctggagtgtgaactcaacctcttccag
acggtgttcaactccctggacatgtcccgctccgtgtcggtgaccacggccggccagtgc
cgccttgccccgctcatccaggtcatcctggactgcagccacctctacgactacacggtc
aagctgctcttcaaactacattcctgcctccctgccgatacccttcagggccaccgtggc
cgcttcctggagcagtttaccaagctgaaagatctcttctaccgctcgagcaacctccag
tacttcaagcggctcctccagatcccacagctgcccgagaacccccccaacttcctgcga
gcctccgccctgtctgaacacgtcagccccgtggtggtcatcccggccgaggcctcgtcc
ccggacagcgagcccgtgctggagaaggatgacctcatggacaaggacgcttcccggcag
aacgtgtttgacaacaagttcgacgacgtcttcggcagccccttcagcagcgaccccttc
aatttcaacagtcagaacggggtgaacaaggatgagaaggaccacctgatcgggcagctg
taccgagagatcagtagcctgaaggggcagctggagagcttgaaggcggagggtcagcgc
accgtgctgcagctgaagggccgcatcagtgagctggaggccgaactggccgagcagcgg
cacctgcgccagcaggcggtcgacgacggcgagttcctccgggctgagctggacgagctc
aagaaacagcgggaggacacagagaaagcccagcggagcctgacggagatcgaacgaaaa
gcccaggccaacgagcagcggtacagcaagctcaaggagaagtacagcgagctggtgcag
aaccacgcagacctgctgcgcaagaatgccgaggtgactaagcaggtgtcggtggccagg
cagttgcaagcagacgtggaacgagagaagcaagagctgcaggagggcttacagcgcctc
actgagcaggcccagaggaagacccaagagcagacggaggttctggagagcttgaaacag
gagctgagcagcagccggcaggaactccaggctctgcagagcaacctgcaagagtccgcg
caggctgagtccaagtggacagcccagatcgccgacctcaagatggagcgggataccttg
ctcgtcaccgcatcccagaaggaggaggagctgcacgccctgcgggaggagctgaagcag
acccagctccagctggccaacgcacaggactctctgagccaggtggcgagggaccaacgt
aagaaactcctggcggagtccaagaaggcggcggagcaggtgatccaggatgccctgcgg
cagctggaggagcccgaagttgctggcagctgcggaactgcagatcaccttctggccaag
accaagtctgtttccaactgcatcgagcagctggagaaaagccgaagccagttcctgtcc
tgccctgacgacatcagcgcgttcctgcagtccgtcaccctcctggcacacttgaccagc
gacacggttatccacggaagctgcacgtccctgcacgccccacaagagcctgctgactct
ctgacggaggcctgcaggcagtacgccatggagacgctcatctacctggcgtacctggac
ggagaagggacgctggcgaacgctgacagcacggccatgcagacgtgcctcagccgcatc
tctgccatcagtgaggagctgctgtccaagggccaggacatcgtgcaggaggagctgggg
gacctggtggacaaggaaatggctgccacggccgccgccatcgaaactgccacggccagg
atagaggagatgctcagcaaagcccgagaaggggacaccggagctaagctggaggtgaac
gaaaggatcctcggctcctgcaccaacctaatgcaggccatccgggtcctgatcgtggcc
tccaaggacctccagagagagatcgtggagagcggccggggcaccgcgtcctccaaggag
ttttacgccaagaactctcgctggacagagggtctcatctcggcctccaaagctgtgggc
tggggagccaccgtcatggtggatgcagctgacatggtggtacaaggcaaagggaagttc
gaggaactgatggtgtgttcccgggaaatcgcagccagcactgcccagctggtggcagcg
tccaaggtgaaagccgacaaggacagccccaacctggcccagctgcagctagcctctcgg
ggcgtgaaccaggccactgcccaggtcgtggcctccaccatctcgggcaagtcgcagatc
gagcagtcagccgaggacatggacttttccagcatgacgctgacccagatcaaacgccag
gagatggactcgcaggtgagggtgctggagctggagacggagctgcagaaggagcggcag
aagctgggggagctccggaagaagcactacgagctggctggggtcgccgagggctgggat
gaagaaaacgaagcctctgctccttcaccacaagcagcggtcccagagcacgagtag
DBGET
integrated database retrieval system
