Sorex fumeus (smoky shrew): 130017738
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Entry
130017738 CDS
T10594
Symbol
RPP40
Name
(RefSeq) ribonuclease P protein subunit p40
KO
K14530
ribonucleases P/MRP protein subunit RPP40 [EC:
3.1.26.5
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130017738 (RPP40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfum03009
]
130017738 (RPP40)
03016 Transfer RNA biogenesis [BR:
sfum03016
]
130017738 (RPP40)
03029 Mitochondrial biogenesis [BR:
sfum03029
]
130017738 (RPP40)
Enzymes [BR:
sfum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
130017738 (RPP40)
Ribosome biogenesis [BR:
sfum03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
130017738 (RPP40)
Transfer RNA biogenesis [BR:
sfum03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
130017738 (RPP40)
Mitochondrial biogenesis [BR:
sfum03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
130017738 (RPP40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuc_P_40
LisH_2
Motif
Other DBs
NCBI-GeneID:
130017738
NCBI-ProteinID:
XP_055964467
LinkDB
All DBs
Position
Unknown
AA seq
363 aa
AA seq
DB search
MATVRRLREVPRHLLVCEKSSFGHEKSRHRHLVETHHYNYRVSVLVPECGLLPQALRAQL
ARAGPYFSVRALPLWELLAPGFIGTFVRGGSCYALSFNTSIDEDNAAALLPSGKLILSLD
KDTYEEMGLQGRPARHAGKNTVKFIVAVDLLDLFLNPASKKSQRVRWSFQEKKPLKFDFL
LAWDPAGAEDSAMMSYFSSYQIREHQPRVVLSTVAELEYPVLQSGEPRGQLGGSCSAPDF
LEWLGAVFSGAEMKNEPDSFVSTYCCPQPSTVAARASVCTLTGLLLPAQVSALLEQLRLY
FEEPKLAPWVALSVQGFADSPVSWGEDEHGFGGSGDHLYSFVIFSNQDYWLQMAVGARDE
CPP
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggccacggtgcgccggctgcgcgaggtcccgcggcacctactggtctgcgaaaagtcc
agtttcggccacgagaagtcgcgccaccggcacctcgtggagacgcaccattacaactac
agggtgtccgtgctggtgcccgagtgcggcctcctgccccaggcgctgcgggcgcagctc
gcccgggccggaccctacttctcggtgcgggccctgccgctgtgggagctgctcgccccg
ggattcatcggcacgttcgtgcggggagggtcctgctacgccctgagcttcaacaccagc
atcgatgaggacaacgccgccgccctgctgcccagcgggaagttaatcttatccctggat
aaagacacgtatgaggagatggggctgcagggccggccggcccgccacgctggcaagaac
accgtgaaattcatcgttgctgttgatctcctggatttattcctgaacccagcttcaaag
aaatcgcagagggttcgctggtccttccaggagaagaagccactgaagttcgactttctg
ctggcgtgggaccctgcaggggcagaagactcggccatgatgtcctacttctccagttac
cagatccgggagcaccagccacgcgtggtcctgagcactgtggccgagctggagtatcct
gtgctgcagagcggggagccccgggggcagctggggggctcctgcagcgcccccgacttc
ctggagtggctgggggccgtcttcagcggcgcagagatgaagaacgagcccgacagcttt
gtctccacctattgctgtccccagcccagcacggtggcggccagggcctccgtgtgtacc
ctcacgggcctcctgctcccggcccaggtctctgccctgctggagcagctgcgcctctac
tttgaggagcctaagctggccccgtgggtcgcactctccgtgcaaggctttgccgacagc
cccgtgtcctggggtgaagacgagcacggctttgggggcagcggcgaccacctgtacagc
tttgtcatcttcagcaaccaggactactggctgcagatggccgtcggcgccagggacgag
tgtccaccctag
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integrated database retrieval system
