Sorex fumeus (smoky shrew): 130017741
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Entry
130017741 CDS
T10594
Symbol
RREB1
Name
(RefSeq) LOW QUALITY PROTEIN: ras-responsive element-binding protein 1
KO
K20210
ras-responsive element-binding protein 1
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130017741 (RREB1)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
130017741 (RREB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_6
zf-H2C2_5
zf-C2H2_REST
zf-C2H2_jaz
zf-C2H2_11
zf-met
zf-C2H2_16
FYDLN_acid
Motif
Other DBs
NCBI-GeneID:
130017741
NCBI-ProteinID:
XP_055964471
LinkDB
All DBs
Position
Unknown
AA seq
1599 aa
AA seq
DB search
MASSSPAGVEGSDLSSINTMMSAVMAVGKVAENGGSPPRIKSPSKAPGPNRIGRRNQETK
EEKSSYSCPLCEKLCSTQHQLTMHIRQHNTDTGGADHSCSICGKSLSSASSLDRHMLVHS
GERPYKCTVCGQSFTTNGNMHRHMKIHEKDPTGATASAPPSPLKRRRLSSKRKLSHDAES
EKEDLVSAKKMLDDGSGDLEKAGDELLRCPICFREFVCKYSLESHVEAHAENPLRCDVCC
VTFRTHRGLLRHNALVHKQLPRDAAGRPFIQNNPAIPAGFHDLGFTDFSCRKFPRISQAW
CETNLRRCISEQHRCVCDTCDKAFPMPAALALHAQTHAAPAPARSPPTDARDQKLFLALL
GLQHTREAGPAPAEEAPPDDNQAIQQQALRGPLPPEPSCPAVLGLSAAALGGPLAVLPFQ
KGFLLQPESGLVVKPVSSESAVELADIQQILQMAAAAPPHLGLPPLSKAPAAPLQTIFKH
MPPLKPKPLVAPRTVVAASTPPPLVSAQQTSPGCTSPSLPPPPLTLLRGAVEAASQAHLL
QSKSGAPTAPLFLPAPRSELPGPADVQARLEQDGLLEALLPLGVEAKIKQEVTEAELKAV
MAGPGRKAPAVRKVLYPCRFCNQVFAFSGVLRAHVRSHLGISPYQCNICDYIAADKAALI
RHLRTHSGERPYICRICQYPFTVKANCERHLRKKHLKATRKDIEKNIEYVTSSAAELVDA
FCAPDTVCRLCGQDLQHHRALRVHMRTHCARPRKPFECRECRAAFTARRHCVHHVLKQHL
HVPESDIDACVLAAAADGPGPTPAAFLEPHNGFLHATAGAAPLPHVTVKLEPAGGFPVHL
SEPLDFSQKGLALVQVKQESPGGFLGAGAAAYDCSLEPIDLSVPKGFRRGDTEAPVPAEG
KKPAQEADSAEPPAAPAPGGVPEKPQPPGGPSAASAPDSGPTQALQGPVRLAVPIYPSTL
VSGPGLLGGPAFLRPLRPKPPLLLPKPPASEELPPLASIAQIISSVSSAPTLLRAKVTDP
GPGLAPADSSGVPKAATVPASSSSPAECSDPPPAPPVANSPEPTSPPDLGSTGASKKRGR
KRALRSRPRAPSGGLDLDSSGEFASVEKMLATTDSHRFTPFLQSAQDGPPPDAGGEEQLG
PPDDTAQQARPAPAPGGPQRLSCPHCPRVFPWASSLQRHLLTHTGQKPFPCQTCDAFFST
KSNCERHQLRRHGLGACSPRRNGLLARRAEREGAGPDSTDSQSDVETAAATGGLVLDLTS
KEKELLPSREAGGRPAEEDEEEAEEEEEEEEEEDGEDEATVESPGPGDGCGAEGKDVDGP
ESDTVSNKSLDLNLASTLMGFKLGTSQPEQKQACGVCGKTFKFLGTLSRHRKAHEHGEGQ
DEAQGAGGPQEGSPAAAPEPRELSAEAPEAPAEKQSEEGEVASDGEAERLAERGGGGGAA
AGAGLAGSKADKRKKVCSVCSKRFWSLQDLTRHMRSHTGERPYKCQTCARTFTLKHSLVR
HQRVHQKARHARPLGKDSDREEAAGEDSGSESTHSGTHPPSESEALGPQEDGAGRTAGSG
QAEAAEPQPESPAPALEPQEPRGKRPGPPPDDSPPPGLE
NT seq
4800 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgagttcgccagcgggtgtggaggggtccgacttgtcttccatcaacaccatg
atgtccgccgtgatggccgtggggaaggtggccgagaatggcgggagccctcctcggatc
aagtctccctcaaaagctccgggaccaaaccggatcggcaggaggaaccaggagacgaag
gaagagaaatcgtcctacagctgcccgctgtgtgaaaagctctgtagcacccaacaccag
ctcaccatgcacatccgccagcacaacacggacacgggtggggccgaccactcctgcagc
atctgcggcaagtcgctcagctccgccagctccctggaccgccacatgctggtgcactcg
ggcgagcggccctacaagtgcaccgtgtgcggccagtccttcaccaccaacggcaacatg
cacaggcacatgaagatccacgagaaggaccccactggcgccacggcatcggccccccca
tcccccctgaagcgcagacgactatcctccaagaggaagctgagccatgatgccgagtcc
gagaaggaagatctggtgtccgccaagaagatgttggatgacggctcgggggacctggaa
aaggcgggggacgagcttcttcgctgccccatatgcttcagggagtttgtgtgcaagtac
agcctggagagccacgtggaggcgcacgcagagaacccgctcaggtgcgacgtctgctgc
gtgacgttccgcacgcaccgcgggctgctgcgccacaacgctctggtgcacaagcagctg
ccgcgcgacgctgccgggcgcccgttcatccagaacaacccggccatccctgccggcttc
cacgacctgggcttcaccgacttctcctgccgcaagttcccgcgcatctcccaggcctgg
tgcgagaccaacctccgccgctgcatcagcgagcagcaccgctgcgtgtgcgacacctgc
gacaaggccttccccatgcccgcggcccttgccctgcatgcgcagacccacgccgcgccc
gccccggcccgcagcccgcccaccgacgcccgtgaccagaagctcttcctggcgctgctg
ggcctgcagcacacccgggaggcggggcccgcgccggccgaggaggcgccgcccgacgac
aaccaggccatccagcagcaggcgctgcgcggcccgctgccccccgagcctagctgcccc
gccgtgctggggctctcggccgccgcgctcgggggcccgctggccgtgctgcccttccag
aagggcttcctgctgcagcccgagagtggtctcgtggtgaagccggtgtctagcgagtcg
gccgtggagctggccgacatccagcagatcctgcagatggccgccgcggcacccccgcac
ctcgggctcccgccactgtccaaggcgccggccgcgccgctgcagaccatcttcaagcac
atgcccccgctgaagccaaagcccctggtcgcgcctcgcacggtggtggccgcctccacg
ccgcccccgctggtcagcgcccagcagacatcccccggctgcaccagccccagcctgccc
ccgccgcccctcacgctgctccggggcgccgtggaggccgcctcgcaggcccacttgctg
cagtccaagtcgggggctcccaccgcccccctcttcctgccggccccccgctcggagctg
cccggcccggcggacgtgcaggcccggctggagcaggacggcctgctggaggcgctgctg
cccctgggcgtggaggccaagatcaagcaggaggtcacggaggccgagctgaaggccgtc
atggccgggccgggcaggaaggcgccggccgtgcgcaaggtgctgtacccgtgccgcttc
tgcaaccaggtgttcgccttctcgggcgtgctgcgcgcccacgtgcgctcccacctgggc
atctccccgtaccagtgcaacatctgcgactacatcgcggccgacaaggcggcgctcatc
cgccacctgcgcacgcacagcggcgagcggccctacatctgccgcatctgccagtacccc
ttcaccgtcaaggccaactgcgagcggcacctgcgcaagaagcacctcaaggccacgcgc
aaggacatcgagaagaacatcgagtacgtgaccagcagcgccgccgagctggtggatgcc
ttctgcgcgcccgacaccgtctgccgcctctgcggccaggacctgcagcaccaccgcgcg
ctgcgcgtgcacatgcgcacccactgcgcgcgcccgcgcaagcccttcgagtgccgcgag
tgccgcgccgccttcacggcgcgccgccactgcgtgcaccacgtgctgaagcagcacctg
cacgtgcccgagagcgacatcgacgcctgcgtgctcgccgcagccgccgacggccccggc
cccacccccgccgccttcctggagccgcacaacggcttcctgcacgccaccgcgggcgct
gcgccgctgccgcacgtgaccgtcaagctggagccggctggcggcttccccgtgcacctg
agtgagcccctggacttctcgcagaagggcctggcgctggtgcaggtcaagcaggagagc
ccgggcggcttcctgggcgcgggcgccgcagcctacgactgctccctggagcccatcgac
ttgtctgtccccaagggcttccgcaggggcgacacggaggcccccgtccccgccgaaggc
aagaagcccgcgcaggaagcagacagcgcagagcctccagccgcacccgcgcccggtggg
gtcccggagaagccccagccccccggggggccctccgcagcctccgccccggactctggc
cccacgcaggccctgcagggccccgtccgcctggcggtgcccatctacccgtccacgctg
gtcagcggccccggcctgctcggcggcccggccttcctgcggcccctgcgccccaagccc
cccttgctcctgccgaagccgcctgcgtccgaggagctgcccccgctggcctccatcgcc
cagatcatctcgtccgtgtcctcggcccccaccttgctgagagccaaggtgaccgatccg
gggcccggactcgctcccgcagacagctcgggcgtccccaaggctgccactgtcccggcc
agcagctccagcccggccgagtgcagcgacccgccccccgcgccccccgttgccaacagc
ccggagcccacctcgccccctgacctggggtccacgggcgcgtccaagaagaggggccgg
aagcgggcgctgcggagccggccccgggcgcccagcgggggcctggacctggactcgagc
ggcgagttcgccagcgtggagaagatgctggccaccacggacagccaccgcttcaccccg
ttcctgcagagtgcgcaggacgggcccccgccggacgctggcggcgaggagcagctgggc
ccgccggacgacacggcccagcaagcacggcccgccccggctcccggcggcccccagcgg
ctctcctgcccccactgcccacgcgtcttcccgtgggccagctccctgcagcggcacctg
ctcacgcacacgggtcagaaacccttcccctgtcagacttgcgacgccttcttttccacc
aagtctaactgcgagcggcaccagctgcgcagacacggactcggcgcctgctccccgcgg
aggaacgggctcctggcgcggcgtgccgagcgcgagggcgcgggccctgatagcacagac
agccagtcggatgtcgagacagcagccgccacgggaggcctggtactggacctcacttcc
aaggagaaggagctgctgcccagccgagaggccgggggacgccccgccgaggaggacgag
gaggaggccgaggaggaggaggaggaagaggaggaggaggatggggaggacgaagccacg
gtggagagcccaggacccggagacgggtgtggagccgagggcaaggacgtggacggcccc
gagtcggacacggtcagcaacaagagcctggacctgaacctggccagcacgctgatgggc
ttcaagctgggcacgagccagcccgagcagaaacaggcctgcggcgtgtgcgggaagacc
ttcaagttcctggggaccctgagccgtcaccgcaaggcccacgagcacggggaaggccag
gacgaggcccagggcgcaggggggccccaggagggctcccctgcggccgccccggagccc
agggagctgtcggcagaggccccggaggcccccgccgagaagcagagcgaggagggggag
gtcgcctccgacggggaggccgagcggctggccgagcgaggcggcgggggcggggcggcc
gcgggggccggcctggcgggcagcaaggcggacaagaggaagaaggtgtgcagcgtgtgc
agcaagcgcttctggtccctgcaggacctcacccggcacatgcgctcccacacaggagag
cggccctacaagtgccagacgtgcgcccgcaccttcaccctgaagcacagcctcgtgcgg
caccagcgcgtgcaccagaaggcccggcacgcccggcctctgggcaaggacagcgaccgc
gaggaggcggccggggaggacagcgggagcgagtccacccacagcggcacacaccccccg
tcggagagtgaggccctcggcccccaggaggacggggcaggccggaccgcaggcagcggg
caggcggaggcggccgagccccagcccgagagcccagccccagcactggagccgcaggag
ccgaggggcaagcggcccggccctccgcccgacgactcgcctcccccggggctggagtga
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integrated database retrieval system
