Sorex fumeus (smoky shrew): 130017782
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Entry
130017782 CDS
T10594
Symbol
ZC3H13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfum03019
]
130017782 (ZC3H13)
Messenger RNA biogenesis [BR:
sfum03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
130017782 (ZC3H13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_2
zf-CCCH_DUS3L
zf-CCCH_PAN3
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
130017782
NCBI-ProteinID:
XP_055964528
LinkDB
All DBs
Position
Unknown
AA seq
1682 aa
AA seq
DB search
MSKIRRKVTVENTKTISDSTSRRPSVFERLGPSTGSTAETQCRNWLKTGNCLYGNTCRFV
HGPSPRGKGYSSNYRRSPERPTGDLRERMKNKRQDVDADSQKRNAEESSSPVRKESSRGR
HREKEDIKITKERTPESEEENVEWETTRDDSDNGDINYDYVHELSLEMKRQKIQRELMKL
EQENMEKREEIIIKKEVSPEMVRSKLSPSPSLRKSSKSPKRKSSPKSSLSANKKDRKTTA
VSSPLLDQQRNSKSNQSKKKGPRTPSPPPPIPEDIALGKKYKEKYKVKDRIDERTRDGKD
RGRDFERQREKRDKPRSTSPIGQHHSPLSSRHHSSSSQSGSSIQRHSPSPRRKRTPSPSY
QRTITPPLRRSASPYPSHSLSSPRKQSPPRHRSPLREKGRHDHERTSQSHDRRHERREET
RGKRDRDKEVREDREYEQDQSSSREHRDDRDPRDGRDRRDARDTRDRREVRDSRDIRDSR
EMRDYSRDNKDSRDPRDSRSARDAHDYRERDNRDTHRKEDTYQEESRSYGRNHLREESSR
TEIRNDSRSESRGEIRNDRLGRSRGRGPELPEKGSRGTRSSQIDSHSSSNYHDSWETRSS
YPERDRYPERDSRDQARDSSFERRHGERDRRDNRERAPMFYTSCCPYPLPPVFSGPAGGT
EKIRDQRPSSPIRHQGRNDELERDERREERRVDRMDDRRDERARERDRERERDRERERER
EREREREKERELERERAREREREREKERDRERERERDHDREREREREREREKEREREREE
RERERERERERERERERERAREREKEQERQRDWEEKEKGRDDRREKREDIREDRIPRDGH
DERKSKKRYRNEGSPSPRQSPKRRREHSPDSDTYNSGDDKNEKHRLLSQVVRPQESRSLS
PSHLTEDRQGRWKEEDRKQERKESSRRYEEHELKEKVSSIEKQREQMEITEISRTRTQDT
AGHHPSEDRDTAERGHDENKKKAKIQKKPIKKKKDDDVGIERSNIETSEDGQIFSPKKGQ
KKKSVEKKRKRSKGDSDISDEEAAQQSKKKRGPRTPPITTKEELVEMSNDKDGTVEESQK
KEDTAFSDWSDEDVPDRAEATDAEHAVTSVTPGRTPSPSSLPPPPPPVANATTTNASSTP
ATAATTTFSTSATTVSTSSTPSSAPSATFASEDSHRKCHRTRVEKVEASHVTIEDAPHRK
PIDQKRSSSLGSNRSNRSHTSSRLRSPSNDSAHRSGDDQSGRKRVLHSGSRDREKTKSLE
ITGERKSRIDQLKRGEPSRSTSSDRQDSRSHSSRRSSPESDRQVHSRSGSFDSRDRLQER
DRYEHDRERERERRDTRQREWDRDADKDWPRNRDRDRLRERERERDKRRDLERERERLIP
DSVERDRDRDRTFENSQVESVKRSEAKLESEHERDLDGTSRDSVALEKDRMDKDTGSVQG
FEDTSKTDRAENMEGDDESKLDDAHSLGSGAGEGYEPISDDELDEILAGDAEKREDQQDE
EKMPDPLDVIDVDWSGLMPKHPKEPREPGAALLKFTPGAVMLRVGLSKKLAGSEVFTKVK
ETCKRLLEKPKDADNLFEHELGALNMAALLRKEERANLLSNLGPCCKALCFRRDSAIRKQ
LVKNEKGNVKQAYTNAPVVDNELLRLSLRLFKRKTTCHAPGHEKTENNKLSQSSIQQELC
VS
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaattagaagaaaggttacagtggaaaataccaagaccatatctgatagtaca
tcccgaaggcccagtgtatttgagaggcttggaccaagcactggcagtacagcagagaca
cagtgtcgtaactggctgaagactggcaactgtctctatggaaatacatgtagattcgta
catggcccttcaccgcgtggtaaaggttatagcagcaattatagaaggtcaccagaaaga
cctactggagatcttagagaaagaatgaagaacaagcgtcaagatgtggatgctgattct
cagaaacgaaatgcagaggagtcgtcctcaccagttaggaaagaatcttcaagaggaaga
catagagaaaaggaagacataaagatcactaaggagagaactcctgaaagtgaagaagaa
aatgtagagtgggaaacaactagagatgattctgacaatggagatattaattatgattat
gttcatgaattgtcactggaaatgaagcgtcagaaaatacagagggaattaatgaagttg
gaacaagaaaatatggagaagcgagaagaaattattattaaaaaggaggtttcacctgaa
atggtcagatcaaaattgtctccatcaccttctctgaggaagtctagcaaatctccaaag
agaaaatcaagtcctaagtcatcgttatctgcaaacaagaaagacagaaaaacaactgca
gtgtcttctcccttgttggaccagcagaggaattcaaaaagcaatcaaagtaaaaagaaa
ggacctcgaactcctagtccaccccctcctataccagaagacattgctctggggaagaaa
tacaaagaaaagtacaaagtaaaagacaggatagatgaaagaacaagagatgggaaggac
agaggacgagactttgaaagacaaagagaaaaaagagacaaaccaaggtctacctcaccc
atagggcaacatcattctcctctgtcttctagacatcactcatcttcctcacaatcagga
tcatctattcaaagacattctccttctcctcgtcgaaaaagaaccccttcaccatcttat
cagaggacaataactccacctttacggcgttctgcttctccttatccttcacattctttg
tcttcaccaagaaagcaaagtcccccaagacatcgctctcccttgcgagagaaagggagg
catgatcatgaacgaacttcacagtctcatgatcgacgtcatgaaaggagagaagaaact
cgaggcaagagagatagagacaaggaggtaagagaagatcgagagtatgaacaggatcag
agctcttctagagaacacagagatgacagagaccctcgagatggtcgggatcgaagagat
gccagagatactagagaccgaagggaagtaagagattctagagacattcgggactccagg
gagatgagagactatagcagagacaataaagacagccgtgatcccagagattctcggtca
gctcgtgacgcccatgactacagggaacgtgacaatcgtgatacacaccgaaaggaggac
acgtatcaggaagaatcccggagttatggcagaaaccatttgagagaagaaagttctcgt
actgaaataaggaatgattccagaagtgagtctcgaggtgaaattaggaatgatcggcta
ggcagaagtaggggaagaggtccagagttgcctgaaaagggaagccgaggcacaagaagt
tctcaaattgatagtcacagtagtagtaactaccatgacagctgggaaactcgaagtagc
tatcctgaaagagacagataccctgaaagagacagccgagaccaagcaagggattcttcc
tttgagagaagacatggggagcgagaccgtcgagacaacagagaaagagctcctatgttc
tacacctcctgctgcccctatcctttgccaccagtgttctcaggtcctgctggggggaca
gagaagatcagagatcaaagaccaagctcaccaattcgacatcagggaaggaatgacgag
cttgagcgtgatgaaagaagagaggaacgaagagtagacagaatggatgatagaagagac
gagagggctagagaaagagatcgggaacgggaacgagatagagaacgggagcgagagagg
gagcgggaaagggaaagagagaaagagagagaactcgaaagagagcgtgctagggaacgg
gagagagagagagagaaagagagagaccgtgaaagagagagagaacgagaccatgaccga
gagagggagcgagagagggagcgagagagggaaaaagaacgggagcgagaaagagaagaa
agggagagggagagggagagagaaagggagagagagagggagagggaacgagaaagagca
agagaaagggagaaagaacaagagcgtcagagggattgggaagagaaagagaaaggacgg
gatgaccgcagagagaagcgagaagatatccgggaagacaggattccaagagatggacat
gatgaaagaaaatcaaagaagcgctatagaaatgaagggagtcctagccctcggcagtca
cctaagcgtcgacgggaacactctcctgacagtgacacgtacaacagtggcgatgataaa
aatgaaaaacatagactcttgagccaggttgtacgacctcaagaatctcgttccctcagt
ccgtcacaccttacggaagacaggcagggcagatggaaagaagaagatcgtaaacaagaa
agaaaagagagctcaagacgctacgaagagcacgaactcaaagagaaagtttcctccatc
gagaagcagagagagcagatggaaatcacagaaatctcaagaacgcgtacacaagatacg
gctggacaccacccatctgaagatcgcgatacagctgagcgaggtcacgatgaaaacaag
aaaaaagcaaaaattcaaaagaaacctattaagaaaaagaaagatgacgatgttggtatc
gagaggagtaatatagagacatctgaagacgggcaaatattttcacccaaaaaagggcaa
aagaagaaaagtgttgaaaaaaaacgtaaaaggtccaaaggcgattctgatatttctgat
gaagaagcagctcagcaaagtaagaagaaaagaggaccacggactccccctatcacaacc
aaagaggaattggttgaaatgtccaatgataaggatggcactgtggaggaatctcagaaa
aaagaagacacagcatttagtgactggtctgatgaggacgtgcctgaccgtgcagaggcc
acagatgcagagcatgcggtcacatctgtgactcctggaaggactccttctccatcgtcg
ctccctcctcctcccccacctgtggctaatgctactactacaaatgcttcttccactcct
gccactgctgctaccacaacctttagcacatctgctaccaccgtatccacctcttccacc
ccttccagtgcccccagtgctacttttgccagtgaagactcacatagaaagtgccatagg
acacgagtggaaaaagtagaagcatctcatgttaccatagaagatgcacctcatcgcaag
ccaatagatcaaaagaggagtagcagccttgggagtaatcggagcaatcgtagtcataca
tccagtcgtctgcgctccccgtccaatgattctgcccatcgaagtggagatgaccaaagt
ggtcgaaagagggtgctgcatagtggctcgagagatagagaaaaaacaaaaagcctagag
atcacaggagagagaaaatctaggattgatcagttaaagcgtggagaacccagtcgaagt
acttcttcagatcgccaggattcaagaagccatagttcaagaagaagttctcctgagtca
gatcgacaagtccattcaagatctgggtcatttgatagcagagataggcttcaagaacgt
gatcgctatgagcatgatagagaacgggagagagagaggagagatacaaggcagagagaa
tgggatcgggatgctgataaagactggccccggaacagggaccgagatagattgcgagaa
cgggagagagaacgagacaaaaggagagatttggaaagggaaagagagagactaattcct
gattctgtggaaagggaccgggatagagacagaacttttgagaattcgcaagtagagtct
gtaaaacgcagtgaagcaaaattggaaagtgaacatgaaagagacctagacggcacttca
agggactctgtagctttggaaaaagacagaatggataaagatacaggatctgtgcaggga
tttgaagatacaagtaaaactgacagagctgagaatatggaaggagatgatgaatccaag
ttagatgatgcgcattctttaggttctggagctggggaaggatacgagccaattagtgac
gatgagctagatgaaattctggcaggtgatgctgaaaagagggaggatcaacaggatgag
gagaagatgccagatccattagatgtgatagatgtggattggtctggtcttatgccaaag
catccaaaagaaccacgagagcctggggctgcgctcttaaaattcacccctggagctgtt
atgctgcgagttggactttctaaaaagttggcgggttctgaagtatttaccaaagtcaaa
gaaacatgtaagagacttctagaaaaaccgaaagatgcagataacctttttgaacatgaa
ttgggagcactcaacatggctgcactgctacggaaggaagaaagagcgaatcttcttagt
aatcttggaccatgttgtaaagctttatgcttcaggcgggattctgctatccgaaagcag
cttgttaaaaatgagaagggcaatgtgaaacaagcttacaccaatgctccagtggtggat
aatgaactgttacgattgagtcttcgattatttaagcggaagactacttgccatgctcca
ggacatgaaaaaactgaaaataataaactctcacagtccagtatccaacaggaactgtgt
gtctcttaa
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integrated database retrieval system
