Sorex fumeus (smoky shrew): 130018018
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Entry
130018018 CDS
T10594
Symbol
RAPGEF1
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04015
Rap1 signaling pathway
sfum04510
Focal adhesion
sfum04722
Neurotrophin signaling pathway
sfum04910
Insulin signaling pathway
sfum05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
130018018 (RAPGEF1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130018018 (RAPGEF1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
130018018 (RAPGEF1)
09156 Nervous system
04722 Neurotrophin signaling pathway
130018018 (RAPGEF1)
09160 Human Diseases
09162 Cancer: specific types
05211 Renal cell carcinoma
130018018 (RAPGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
130018018
NCBI-ProteinID:
XP_055964818
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All DBs
Position
Unknown
AA seq
1195 aa
AA seq
DB search
MSGRLEKADSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKPAEVSVKIPDKPVNKEAAGR
FLPERCPLPLDLERQAVEFMSTSAQRQKNQSWLGEKEKEVVSALRYFKTIVDKMAIDKKV
LEMLPGSASKVLEAILPLVQSDPRIQHSSALTSCYSRVYQSLANLIRWSDQVMLEGVDSD
DKDMVTSVKGVIKAVLDGVKELVKLTIEKQGHPSPTSPAKPSPPACRSDSQPELPLTDRE
MEILNKTASLSPPPELLPDAVDGEAAPPKPPLPGIRVVDNSPPPALPPKKRQSAPSPTRV
AVVAPMSRATSGSSLPAGINRQDFDVDCYAQRRLSGGSHSYGGESPRLSPCSSMGKLSKS
DEQLSSLDRDSGQGSRNTSCETLDHYDPDYEFLQQDLSDADQLPPQAACSLSPLPESSGE
SGSPCLGAPFQLPPDLPPALPQKKRRSAASQTSEGSGGRAACERHPSQYDNVSEADLHSP
SAFPPFAAVPPFQQAAAPHPVEFVGDFTVPEPAGDPEKPPPLPEKKNKHMLAYMQLLEDY
SEPQPSVFYQTPQSEHVYHQKNRHLMEVYGFNDSFSGDAPQELAPPPALPPKQRQLQASY
AASSFSSVSYTTVAFRPEDGSAAPGLSASVSNSFLSRHGALAVPSHKSVLRSYSQGFVPP
RQASGQPCLPPTSSSSPHFPPAHPPHSSDLAGPTAAGLPSSTVDGPPAASQESTLHGNAV
CLPSETSLTDAPPTPPESPAVRDGHPRGPSSAGGAAGTEGRDGGERLPSSPDAAESAQSE
EEVDELSLIDHSEIMARLTLKQEGDDGPDVRGGSGDILLVHATETDRKDLVLYCEAFLTT
YRTFITPEELIKKLQYRYEKFSAFADTFKKRVSKNTFFVLVRVVDELCLVELTEEILKLL
MELVFRLVCSGELSLARVLRKNILDKVEQKRLLRCASSDQPLAARGVAARPGTLHDFHSH
EIAEQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSIIMQQEK
AQDRERLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLAEYCTLID
SSSSFRAYRAALSEVEPPCIPYLGLILQDLTFVHLGNPDYIDGKVNFSKRWQQFNILDSM
RCFQQAHYDIRRNDDVISFFNDFSDHLAEEALWELSLKIKPRNIARRKTDREEKT
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgtccggccggctggagaaagcagactctcagcgttcccacctctcctccttcaccatg
aagctcatggacaagttccactcgcccaaaatcaagaggacgccgtccaagaaggggaag
cccgccgaggtgtcagtgaagatccccgacaagccggtgaacaaagaggccgcaggcaga
ttcctccccgagcgctgccctctccccctggacctggagcggcaggcagtagagtttatg
tccaccagtgctcaaaggcagaagaaccagagctggctgggggagaaggagaaggaggtg
gtcagtgccttgcgctacttcaagaccatcgtggacaagatggccatcgacaagaaggtc
ctggagatgctgcccggctcggccagcaaggtgctagaggccattctgcccctggtgcag
agtgacccgcgtatccagcacagctcggccctgacctcctgctacagccgcgtgtaccag
agtctcgccaacctcatccgctggtccgaccaggtgatgctggagggcgtggactcggac
gacaaggacatggtgaccagcgtgaagggggtcatcaaggcagtgctggacggagtgaag
gagctggtcaagctgaccattgaaaagcaggggcacccgtcccccaccagcccagcgaag
ccgagccccccagcctgcagatctgacagccagcccgagctgccgctgactgaccgggag
atggagatcctgaacaagacggccagcctgtccccgccccctgagctgctccccgacgcc
gtggacggggaggccgcgccccccaagccccccttacccggcatccgggtcgtggataac
agccccccgcccgctctgccgcccaagaagcgacagtcggccccgtccccgacgcgtgtg
gccgtcgtggcccccatgagccgggctaccagcggctccagtttgccggctggcatcaac
aggcaggacttcgacgtggactgctacgcgcagcgacggctctcgggcggcagccactcg
tatgggggcgagtccccccgcctgtccccctgcagcagcatgggcaagctcagcaagtcg
gacgagcagctgtcctcgctggaccgggacagcgggcaaggctcccggaacaccagctgt
gaaacgctcgatcactacgaccccgactacgagttcctgcagcaggacctctccgacgcc
gaccagctacctccgcaggcggcctgcagcctcagcccgctgcccgagtcctcgggggag
tccggctcgccctgcctcggggcccccttccagctgccccccgacctgccgccggccctg
ccccagaagaagcggcggagcgcggcctcgcagacgtcggagggctcggggggccgcgcg
gcctgcgagcgccacccgtcccagtacgacaacgtctccgaggccgacctgcacagcccc
agcgccttcccgcccttcgccgccgtgccccccttccagcaggccgcggccccccaccct
gtcgagtttgtgggcgacttcacggtgccagagcccgcgggcgaccctgagaagccgccg
cccctcccagagaagaagaacaagcacatgctcgcctacatgcagctgctggaggattac
tcggagccgcagccgtccgtgttctaccagacgccgcagagcgagcacgtgtaccatcag
aagaaccggcacctcatggaggtctacggcttcaacgactccttcagcggcgacgccccc
caggagctggccccgccccccgccctgccccccaagcagcggcagctgcaggcctcctat
gctgcctcctccttctcctctgtctcctacaccacagtggccttccgccccgaggacggc
agtgccgctccgggcctcagtgcatccgtctctaactcctttctcagccggcatggcgcc
ttggccgtgccctcgcacaagtccgtgctcaggtcctactcgcagggcttcgtgccgccc
cgccaggcttccgggcagccttgcctgccgcctacctcctcttcctctccacacttccca
cctgcccacccgcctcacagctctgacttagcggggcccaccgcggccggcctgccctcc
agcaccgtggacgggcccccggcagcttctcaggagagcaccttgcacgggaacgctgtc
tgcctcccttccgaaacctctctcactgacgcgcccccgacgcctccggagtcgccagct
gtgagagacggacacccccgaggcccctcgtcggccggcggtgcggccgggacggaaggc
agagacggcggggaaaggctgccttcgtccccggacgctgcggagtcggcgcagtcggag
gaggaggtggacgagctgtcgctcatcgaccacagtgagatcatggccaggctgacgctc
aagcaggagggtgacgacgggccagacgtgcgagggggctctggggacatcctgctggtg
cacgctactgagacggacaggaaagacctggtgttgtactgtgaggccttcctgaccacc
tacagaaccttcatcacccctgaggagctcatcaagaagctgcagtatcgctatgagaaa
ttctcggcctttgccgacaccttcaagaagcgcgtgagcaagaacaccttcttcgtgctg
gtgcgagtggtggacgagctctgcctcgtggagctgaccgaggagatcctgaagctgctg
atggagctggtgttccgcctggtgtgcagcggggagctcagcctggcccgcgtgctccgg
aagaacatcctggacaaggtcgagcagaagaggctgctccggtgtgccagctccgaccag
ccgctggccgccaggggcgtggcagcccggccggggaccttgcacgacttccacagccat
gagatcgccgagcagctcacgctgctggacgccgagctcttctacaagatcgagatcccc
gaggtgctgctgtgggcaaaggagcagaatgaggagaagagccccaacctcacgcagttc
acggagcacttcaacaacatgtcctactgggtccggtccatcatcatgcagcaggagaag
gcccaggaccgggagcggctgctgctcaagttcatcaagatcatgaagcacttacggaag
ctgaacaacttcaactcgtacctggccatcctctcggcgctggactcggcgcccatccgc
aggctggagtggcagaagcagacgtcggagggcctggccgagtactgcacgctgatcgac
agctcgtcgtccttccgcgcctaccgggctgccctgtccgaggtggagccgccctgcatc
ccttacctgggcctcatcctgcaggacctgacctttgtgcacctgggcaaccccgactac
atcgacggcaaagtgaacttctccaagcgctggcagcagttcaacatcctggacagcatg
cgctgcttccagcaggcgcactacgacatccggaggaacgacgacgtcatcagcttcttc
aacgacttcagcgaccacctggccgaggaggcgctgtgggagctctcgctgaagatcaag
ccccggaacatcgcccgcaggaagacagaccgcgaggagaagacctag
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