Sorex fumeus (smoky shrew): 130018062
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Entry
130018062 CDS
T10594
Symbol
FUBP3
Name
(RefSeq) far upstream element-binding protein 3 isoform X1
KO
K13210
far upstream element-binding protein
Organism
sfum
Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfum03019
]
130018062 (FUBP3)
03041 Spliceosome [BR:
sfum03041
]
130018062 (FUBP3)
Messenger RNA biogenesis [BR:
sfum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
130018062 (FUBP3)
Spliceosome [BR:
sfum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130018062 (FUBP3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
FUBP_C
KH_Vigilin
KH_PNO1_2nd
KH_NusA_2nd
KH_KHD4_2nd
CG7065_mid
Motif
Other DBs
NCBI-GeneID:
130018062
NCBI-ProteinID:
XP_055964900
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MAELVQGQSAPVGMKPEGFVDALHRVRQIAAKIDSIPHLNNSTPLVDPSVYGYGAQKRPL
DDAVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGI
PERPCVLTGTPESIEQAKRLLGQIVERCRNGPGFHSDVDAGSTVQELLIPASKVGLVIGK
GGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMVLEIIREKDQADF
RGVRDFSSRMGTGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAA
QVMGPPDRCQHAAHVISELILTAQERDGFGGLAVARGRGRSRGDWSMGAPGGLQEITYSV
PADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPSTDPGLRVFTIRGVPQQIEVARHLI
DEKVGGAGLGAPGAFGQSPFGPPPTAHPSTFPARSSGCFPSLAAKVNGNPHSGPVSGPPA
FLTQGWGSTYQPWQPPSQQAPSQQSQPQSGQPDYSKAWEEFYKKQSHAASAAPPASSPPD
YSLAWAEYYRQQVAFYGQSLGQAQAHSQEQ
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctggtgcagggccagagcgcgccggtggggatgaagcccgagggcttcgtg
gacgccctgcaccgggtccggcagattgctgctaaaattgattcaattcctcacttgaat
aattccacgcctctagtggacccctcagtgtacggatacggagcacagaagcggcccttg
gacgacgcagtaggtaaccagttaggggccttggtacatcaaagggcagtaatcacagaa
gaattcaaagtacctgataaaatggttggctttattattggcaggggaggtgagcagatc
tcacggattcaagcagaatctggttgcaaaattcagatagcttcagagagttctgggatt
ccagagaggccctgtgtacttaccggaaccccagaaagtattgaacaagccaagcggctc
ttgggacagatcgtggagcgctgccgcaacgggcccggcttccacagcgacgtggacgcc
ggcagcacggtccaggagcttctcatccccgcgtccaaagtgggcctggtcatcggcaaa
ggaggggagacgataaagcagctgcaggagcggacgggagtgaaaatggtcatgatccag
gacggcccgttgcccacgggagcagacaagccgcttcgcatcaccggagacccgttcaag
gtccagcaagcgcgggagatggtgttagagatcatccgggagaaggaccaggccgacttc
cgaggcgtgcgcgacttcagctcccggatgggcacgggcagcatagaggtgtcagtgccc
aggtttgctgttgggatcgtcatcggaagaaatggggaaatgatcaagaagatccagaac
gacgcgggagtaaggatccagttcaagccagatgacgggatcagtccggagagggctgcc
caggtcatgggcccccccgaccggtgtcagcacgcggcgcacgtcatcagcgagctcatc
cttacagctcaggagagagacggcttcgggggcctggcggtggcccggggacgaggccgc
agccgcggggactggagcatgggtgcgcccgggggcctgcaggagatcacgtactcagtg
cccgccgacaagtgcggcctcgtcatcggcaaaggcggcgagaacatcaagagcataaac
cagcagtcgggggcccacgtggagctgcagcggaacccgccccccagcactgaccccggc
ctacgcgtcttcaccatccggggcgtgccccagcagatcgaggtggcccggcacctcatc
gacgagaaagtcgggggtgcaggtcttggagctccaggcgcctttggacagagccccttc
ggcccgccgcccactgcccaccccagcactttcccggcccggagctcagggtgcttcccc
agcctcgccgccaaggtgaacgggaacccgcacagcggccctgtgagcggccccccggcc
ttcctgacgcagggctggggcagcacctaccagccgtggcagccgccctctcagcaggcc
ccaagccagcagagccagccgcagagcggccagcccgactacagcaaggcctgggaagag
ttttacaaaaagcagagtcacgcggccagcgcggcacccccggccagctccccgccggac
tacagcctggcctgggccgagtactaccggcagcaggtcgccttctacgggcagagcctc
gggcaggcgcaggcccacagccaggagcagtag
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