Sorex fumeus (smoky shrew): 130018429 Help Entry 130018429         CDS       T10594                                  Symbol POLQ Name (RefSeq) DNA polymerase theta   KO K02349   DNA polymerase theta [EC:2.7.7.7] Organism sfum  Sorex fumeus (smoky shrew) Brite KEGG Orthology (KO) [BR:sfum00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:sfum03400]     130018429 (POLQ) Enzymes [BR:sfum01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.7  DNA-directed DNA polymerase      130018429 (POLQ) DNA repair and recombination proteins [BR:sfum03400]  Eukaryotic type   Other factors with a suspected DNA repair function    DNA polymerases     130018429 (POLQ) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DUF4332 Helicase_dom4_arc RIH_assoc Motif Other DBs NCBI-GeneID:  130018429 NCBI-ProteinID:  XP_055965104 LinkDB All DBs Position Unknown AA seq 2563 aa AA seqDB search MNLPRRARKRRRPMPGSGSSGSDGDGGDGPLGSSGPGLSPPGAAPGECKLTIPDGQTDKR LLANWGLPTAVLEKYHSFGVKKMFEWQAECLLLGRVLEGKNLVYSAPTSAGKTLVAELLI LKRVLEIRKKALFILPFVSVAKEKKYYLQSLFQEVGIKVDGYMGSTSPAMHFSSLDIAVC TIERANGLINRLIEENKLDLLGIVVVDELHMLGDSHRGYLLELLLTKICYITRKSTFCQA HLANPDSNAIQIVGMSATLPNLKLVASWLNAELYHTDFRPVPLLESIKIGNSIYDSSMKL VREFQPMLQVKGDEDHIVSLCYETIRDNHSVLLFCPSKKWCEKLADTIAHEFYNLYHQSE GLQRSSELPPVILEHKGILEVMDQLKRLPSGLDSVLKKTVPWGVAFHHAGLTFEERDIIE GAFRQGQIRVLAATSTLSSGVNLPARRVIIRTPIFSGRPLDILSYKQMVGRAGRKGVDTV GESILVCKNSEKSKGIALVQGSLKPVRSCLRRQEGEEVTTSMIRAILEIIVSGVARTSQD MQTYASCTFLAVSMKEVKQGIPENQDSVQLGAIEACVMWLLENEFIQITEARDGTEEKVY CPTHLGSATLSSSLSPIDTLDIFADLQRAMKGFVLENDLHIVYLVTPMFEDWTTIDWYRF FCLWEKLPTSMKRVAELVGIEEGFLARCVKGKVVARTDRQYRQMAIHKRFFTSLVLLDLI SEVPLKEINQKFGCNRGQVQSLQQSAATYAGMITVFCNRLGWHNMELLLSQFQKRLTFGI QRELCDLIRVSLLNAQRARFLYASGFLTVADLARADISEVETVLRSAAPFKSARKAVDED EEAAEERRNMRTIWVTGKKGLTEREAAALIVEEANMILQQDLVEMGVQWNPYSLSKSNSL SSNESELKEHKLVPQIKHFKKKQKEKSNALSRNKSYTVFHDSSVMRPLNTMQDLNQSGEH TDSTCYEPQKDNQVHQIHCFSRARKWVSSSINNKLGTSLRKPSKIAVQTVSPEKTEKETF SLEKISKTYGSSKPSKRLKRLKNSSPVEGTGMSKINLQEQPVSNPFQSENSFTFDENNMK FRTPEPSAKMASSCGKEKHNKTSFPAHQEQNCSQNRPPANDILAEQTIAELPNKAVTCPI SSVVSTNGRGLAVVESENVNSALVQNDSKNQTVKHHDTYLTNQSLNNESDKEINNDAKEK KLIERQMPYETASSCRNSDLNATECKNIKFNTGERKSNGFQVLGDKISSTDIHSEVLQPA ETFDRSGNQHENFLNTCEVGEEPNAYTVSRGKNNCVSNLGSDFEDSLYLDTQSEKIIQQM TIENARDETKDFNLAKGIMQKSFDKKSSMSSLQEIHIAFPRDPHFSEVTNADHLKLKIED MKESSDSHAVDSLIPESPILYSPVLIGENGPCFKGNEHSVTDSQLNSFLQGYQTQETIKP VIPLVPQKSTPTGVEVECLPVRETSLNLSDSLLFDSFSEDCPVKEQPDQQAKEPLDPSEI TSAHVKNSLCFQPEESIKKSNGNQDNQQLLTCFSDESIIFSEIDSAQMADALENRDIFPT QEKLNTSVSLRPLELSDPAILNKDYLQREEIESDKDEKSQKYIFSGTRQNKSFIWSESSF DLSTGLQRILDKVPSPLESKELNIQKGKHTELNDRQEVILNLESNQVCGILLSSNTEAKG KMDTVENNVTPSKTSSLLPHIDDNGLIPPTPMPASASKLAFSGVCGTSSIKLQKNSSILQ LGESHSLESPSNIKKPNLSFECRSIFRNNSPTQDTSFSLKLSQDELQLTASSCSSESLTI IDVASDQSLFETFIKEWQSKKRFSISLACEKFSNLTSSKSATIGGRFKQANSPQETPIRD DGFPVKGCDDLFVVGLAVCWGGRDAYYFSLQKEQKDSEISASLAAPSLDPRLTVKDRMWH LQSCFQKASDKERSVIIYDFIQSYKILLQSCGISLEQSYEDPKVACWLLDPDSKEPTLHS IITSFLPHELPLLEGIETGQGIQSLGLNVSTEHSGRYRASVESILVFNAMNQLNSLLKKE DLHDVFHNVEMPSQYCLALLELNGIGFSTTECESQKHIMQAKLDSLETQAYQIAGHTFSF TSSDDIAEVLFLELKLPPNGEIKNQSSKKTLGATRRGNNNGQKLKLGKQFSTSKDVLNKL KALHPLPGLILEWRRITNAMTKVVFPLQREKHLNHFLGMERIYPTSQSHTATGRITFVEP NIQNVPKDFEIKMPTLVEESPPSQVAGRGLLPKGRGRNRKRYDMSPWHQAEKEERASDRG MPFSVSMRHAFVPFPGGFILAADYSQLELRILAHLSHDRRLIQVLNSGGDVFRSVAAEWK MVEPECVGDTLRQQAKQICYGIIYGMGAKSLGEQMGIKENDAACYIDSFKSRYTGINHFM RETVQNCRRNGFVQTILGRRRYLPGIKDNNPYHKAHAERQAINTTVQGSAADIVKIATVN IQRQLETLHSTFKSHGHREGVLRSDRKGKLPKRKLQGMFCPIRGGFFVLQLHDELLYEVA QEDIVQVAQIVKKEMENAIKLSVNLKVKLRIGASWGALEDFDV NT seq 7692 nt NT seq  +upstreamnt  +downstreamnt atgaatcttccccggagggcgaggaagcggcggcgcccgatgccgggctccggctcctcg gggagcgacggcgacggcggagacggcccgctgggctcctccgggccggggctgagcccg cccggcgccgcgccaggggaatgcaagctcacaattcccgacggccaaaccgacaaacga cttttggcaaactggggacttcctacggccgttctggagaaatatcacagttttggtgta aaaaagatgttcgaatggcaggcagagtgccttttgcttggacgcgtgctagaaggaaag aatttggtctattcagctcctacaagtgctggaaaaactctggttgctgaattacttatt ttgaagcgtgttttggaaattcggaagaaagctttgtttattctgccctttgtgtctgtg gctaaagagaagaaatactatctccagagtttgtttcaggaagtaggaataaaagtagat gggtatatgggcagtacttccccagcaatgcatttctcttccttggatattgctgtctgc acaattgagagagccaatggtctgatcaatcgccttatagaggaaaataagctggatttg ctaggaatagtggttgtggatgaattgcatatgttgggagactctcaccgagggtatttg ttggaacttttgctgaccaagatttgctatattactcggaaatcaacattttgccaagca catttagccaaccctgactctaatgccatacagattgttggtatgagtgcaactcttcct aatttgaaacttgtagcttcctggttgaatgctgaactctaccacactgactttcgtcct gtaccactgttggagtccataaaaattggaaattccatatatgattcttcaatgaagctt gtgagggaatttcaacccatgctacaagtgaagggagatgaggatcatattgttagttta tgttatgagaccattcgtgataaccattcagtgctacttttctgtccatcaaagaaatgg tgtgagaagctggcagataccattgcccatgaattttacaatctgtaccatcagtctgag gggctgcaaagatcatctgaacttccaccagtgattctagaacacaagggtatcctagaa gtgatggatcaattaaaacgtttgccttcaggactggactctgttttgaaaaaaactgta ccatggggagtagcgtttcatcatgcaggtcttacttttgaggagagggatattatagaa ggagcctttcgtcaaggtcagattcgggtcttggcagcaacttcgactctttcatctggg gtgaatttacctgcacgccgtgtaattattcgaacacctatttttagtggtcgaccacta gatattctttcttacaagcagatggttggccgcgctggtaggaaaggagtggacacagta ggtgagagtatcttagtttgtaagaactctgagaagtcaaaaggcattgcgttagtccag ggatctcttaaacctgttcgcagctgtctgagaagacaagaaggagaagaagtaactacg agcatgatacgagctattttggagattatagtcagtggagtggcaagaacatcacaagat atgcagacttatgcctcttgcacatttttggctgtgagtatgaaagaagtgaagcaggga attccagaaaatcaagattctgttcaacttggtgcaattgaggcctgtgtaatgtggctg ctagaaaatgaatttattcagattactgaagctagagatggaacagaagaaaaagtgtat tgtccaacacatcttggttcagcaactctctcctcttcactttctccgattgatacttta gatatttttgctgacctccaaagagcaatgaagggctttgttttagagaatgatctacat attgtctatctggttacacctatgtttgaggattggactactattgattggtatcgattt ttctgtttatgggagaaactaccaacttcaatgaaacgagttgcagagctagtgggaatt gaagaaggtttcttggctcgttgtgtgaaaggaaaagtagtagccagaactgacagacaa taccgacagatggccatccataaaagatttttcaccagtcttgtgctattagatttaatc agtgaagttcccttaaaagaaatcaatcagaagtttggatgcaatcgtggacaggttcaa tctctgcaacagtcagctgcaacttatgcagggatgattacagtgttttgcaaccgcctg ggctggcacaacatggaactactcctttcccagtttcagaagcgcctcacctttggtatc cagagggaactgtgtgacttgatccgggtgtccttactgaatgcacagcgagccaggttc ctttatgcttccggctttcttactgtggcagatcttgccagggcagatatttctgaagtg gagactgttctgagaagtgctgcaccttttaaaagtgcccgaaaggcagtggatgaggac gaggaagcagctgaagaaaggcggaacatgcgaactatttgggtgactggaaaaaaaggc ttgactgaaagagaagccgcagccctaatagtggaagaagctaacatgattctgcaacag gatttagtggaaatgggagtgcagtggaatccatattccctttcaaaatctaattcattg tccagcaatgagtcagaactaaaggaacataagcttgtacctcaaattaagcattttaag aagaaacaaaaggaaaaaagtaatgcactatcaaggaacaaaagttatacagtatttcat gattcttctgttatgcgtcccctaaatacaatgcaagatttaaatcaaagtggagagcat acagattctacttgttatgagccccagaaagacaatcaggtacatcaaatacattgtttt tcgagagcaagaaaatgggtttcttcgagtataaataataagttaggaacctctctgagg aaaccaagtaagattgctgttcagactgtctcacctgagaaaactgaaaaagaaacgttc agtttggaaaagattagtaaaacctatggatcttcaaaaccgagtaaacgtctaaaacgt ttgaaaaacagcagcccagtggaaggcactggaatgtctaaaattaatttacaagaacag cccgtatccaatccctttcagagtgaaaactcgtttacctttgacgagaacaatatgaaa tttagaactccagagccatctgctaaaatggcatcctcttgtggcaaggaaaaacataac aaaacttcattcccagcacaccaagaacaaaattgctcacagaacagaccccctgctaat gacattcttgcggaacagactatagcagaacttccaaataaagcagtgacctgtccaatc tctagtgtggttagtacaaatggaagaggattagctgttgttgagtcagaaaatgtaaac agtgcattagtacaaaacgattcaaaaaaccagactgtgaaacaccatgatacttatcta actaaccagagtttaaacaatgagtctgataaagaaataaataatgatgccaaagagaaa aaattaatagagagacaaatgccctatgagacagctagtagttgtagaaatagcgactta aatgccactgaatgtaaaaacatcaagtttaataccggggaaaggaaatcgaatggtttt caagtattgggagataaaataagcagcactgatatacatagtgaagtacttcagccagct gaaacattcgatagatctggaaaccaacatgaaaattttttgaatacatgtgaagtaggg gaagaaccaaatgcttatacagtaagcaggggtaaaaataattgtgtttctaacctaggc tcagattttgaagacagtttgtatcttgatactcagtcagaaaaaataatacaacagatg acaattgaaaatgctagagatgaaacaaaggacttcaacctagccaaaggaataatgcaa aagagctttgacaaaaagagctcaatgagctctttacaggagattcacatagcttttcct agagatccacacttctcagaagtaacaaatgcagatcatttgaaacttaaaatagaagat atgaaagaaagctctgattcacatgctgttgatagtctgattccagaaagcccaattttg tattctccggtactaattggggaaaatggtccttgttttaaagggaatgaacattctgtt actgactcccaattaaatagttttcttcaaggttatcagacacaagaaactattaagcca gttatacctctggttcctcaaaagtcaactcccactggcgtcgaggtagaatgtctgcca gttcgtgaaacaagtttgaatttgagtgatagtttactatttgatagcttcagtgaagat tgcccagtaaaagaacaacctgatcaacaagcaaaagaacctctagatccttctgaaatc acatcagcccatgttaagaattctctgtgttttcaaccagaggagtcaattaaaaagtca aatgggaatcaagataatcagcaactgttgacttgttttagtgatgagtctattatcttc tcagaaatagattcagctcagatggctgacgctttggaaaatagagatatatttcctact caagagaaacttaatacttcagtatctcttaggcctttagaactcagtgatccagcaatt ttaaataaggattatcttcaaagagaagaaattgaaagtgataaggatgaaaagtctcaa aaatacatattctctgggacaaggcaaaacaaatcattcatatggtctgagtcatcattt gacttaagtacaggactgcaaaggattttagataaagtgcccagtcctctagaaagtaaa gagctaaacatacagaagggaaaacatacagagctaaatgacagacaagaagtgattttg aatttggagtcaaatcaagtgtgtggaattttattatcctctaatacagaagcaaaaggc aagatggacaccgtggagaacaatgtcactcccagcaaaacctcatctctcctgccacat attgatgataatggtctcattcctcctacacccatgccagcatctgcttctaagttggca ttttcaggtgtttgtggaacatcttctataaaacttcagaaaaatagtagcattttacaa cttggtgaaagtcattcattggaatcaccttcaaatattaaaaagcccaatttaagtttc gagtgtagaagtattttcagaaacaacagtcctacccaagatacaagtttttcactgaag ttatcacaagatgaattgcagttaactgcatcctcatgcagttcagaaagtctgaccata attgatgtggcaagtgaccaaagtctttttgaaacattcattaaggagtggcaaagcaaa aagcgattttccatttcactggcttgtgaaaagttcagcaatttgacatcatctaaaagt gctacaattggtggtaggtttaagcaagctaactcacctcaggaaactcctattagagat gatggatttcctgttaaaggttgtgatgatctctttgtggtcggattggcagtatgttgg ggtggaagggacgcctactatttttcattgcagaaggaacaaaaggattctgaaattagt gccagtttggctgcaccttctctggatccaaggctgactgtgaaagacagaatgtggcat cttcagtcctgttttcaaaaagcatctgacaaagaacgttcggttatcatctatgatttc atccagagctataaaattcttcttcagtcttgtggcatctccctagaacaaagttatgaa gatcctaaggtggcatgctggttactagatcctgattctaaggagccaactcttcacagc atcattaccagttttctccctcatgagcttccactcttggaagggatagaaactggccaa ggaattcaaagcctgggcctaaatgtgagcactgagcattctgggagatacagagcatct gtggagtccatccttgtcttcaacgccatgaatcaacttaactctttgttaaagaaggaa gaccttcacgatgttttccataacgtggaaatgccgtctcagtactgcttggccttgtta gaactgaatgggattggctttagcaccacagagtgtgaaagtcagaagcacataatgcag gccaagctggactccctggagactcaggcctatcagatcgcaggccacaccttttccttc acaagttccgatgacattgctgaggttttatttctggagttgaagttaccaccaaacgga gagataaaaaaccaaagcagcaagaaaaccctgggtgccaccagaagagggaacaacaac ggacagaagctaaagctgggaaaacagttcagcactagtaaggatgttttaaataaatta aaggcattacatcctctaccaggcttgatattagaatggagaagaatcacgaatgctatg acgaaggtggtctttcccttgcaacgggaaaagcatctgaatcattttctgggaatggaa aggatctatcctacgtcacagtcacacacagctacaggacgaatcacttttgtagagcca aatattcaaaatgtgccaaaagattttgagatcaaaatgccaacactagtcgaggagagt ccaccttcccaggtggcaggcaggggcctccttcctaagggcagaggaagaaataggaag agatatgacatgagcccttggcaccaggcagagaaggaagagagagcctccgacagagga atgcctttttctgttagcatgcgacatgcctttgtgccctttccaggtggtttcatattg gctgctgattactctcaacttgaactgaggatcttggctcatttgtcccacgatcgtcgt ctcattcaagtactaaactctggtggtgatgttttcagaagtgttgcagctgagtggaag atggtggagccagagtgtgttggagacactctgaggcagcaggcaaagcagatttgttat ggaatcatttatggaatgggagcaaaatctttgggagagcagatgggcattaaagaaaat gatgctgcttgctacattgattccttcaagtctagatacacaggaattaatcatttcatg agagagacagtgcagaactgtaggagaaatggatttgttcaaaccattttgggaagacgc agatatttaccaggaattaaagacaacaacccttatcataaagctcatgccgagcgtcag gctatcaacaccacggtccaaggatcagcagctgatattgtcaaaatagccacagttaat attcagagacaactagagactctccattcaaccttcaagtcccatggtcatcgggagggt gtgcttcgaagtgacaggaaaggaaagttgcccaagagaaaacttcagggcatgttctgc ccaatcagaggcggtttcttcgtccttcaactccatgatgaactcttatatgaagtggca caagaggatattgttcaggtcgctcagattgtgaagaaagaaatggaaaatgccataaaa ctttctgtgaatctgaaagtgaagctgagaataggtgccagctggggcgccctggaggac tttgatgtgtga

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