Sorex fumeus (smoky shrew): 130018497
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Entry
130018497 CDS
T10594
Symbol
STXBP5L
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfum04131
]
130018497 (STXBP5L)
Membrane trafficking [BR:
sfum04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130018497 (STXBP5L)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
130018497 (STXBP5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WD40
WD40_Prp19
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Lgl_C
Beta-prop_NUP159_NUP214
Beta-prop_TEP1_C
EIF3I
RAB3GAP2_N
Synaptobrevin
Beta-prop_VPS8
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
130018497
NCBI-ProteinID:
XP_055965165
LinkDB
All DBs
Position
Unknown
AA seq
1256 aa
AA seq
DB search
MKKFNFRKVLDGLTASSPGSGSSSGGNSGGGAGSGSVHPGGTAGVLREEIQETLTSEYFQ
ICKTVRHGFPYQPTALAFDPVQKILAIGTRTGAIRILGRPGVDCYCQHESGAAVLQLQFL
INEGALVSASSDDTLHLWNLKQKRPAILHSLKFNRERFLRCGSLVIDLRLFLFSNSKWLY
VGTERGNTHIVNIESFILSGYVIMWNKAIELSTKTHPGPVVHLSDSPRDEGKLLIGYENG
TVVFWDLKSKRADLRVYYDEAIHSIDWHHEGKQFMCSHSDGSLTLWNLKSPSRPFQTTIP
HGKSPREGRKSESCKPILKVEYKTCKNSEPFIIFSGGLSYDKACRKPSLTIMHGKAITVL
EMDHPIVEFLTLCETPYPNEFQEPYAVAVLLEKDLIVVDLTQSNFPIFENPYPMDIHESP
VTCTAYFADCPPDLILVLYSTGVKHKKQGYSNKEWPVSGGAWNLGTQTFPEIIITGHADG
SVKFWDASAITLQMLYKLKTSKVFEKQKPGEGKQTCEIVEEDPYAIQMIYWCPESRIFCV
SGVSAYVIIYKFSKHEITTEIVSLEVRLQCDVEDIITPEAETSPPFPDLSSQLPSSRSLS
GSTNTVESEGATKDSIPCLNVKSKPVRMPPGYQAELVIQLVWVDGEPPQQITSLAVNSAY
GIVAFGNCNGLAVVDFIQKTVLLSMGTIDLYRSSDLYQRQPRSPRKNKQFIADSGMISLP
FTLDYFSLFPLPAADAGALACSKDNFCMRGLSNFYPDLTKRIRTSYQSLTELNDGPVPLE
LERCKSPTSGLATRTPDAAPGFYRNDIPTVRQRNQVHHLPDHVNGHCTSPTQSCGSGKRL
SSADVSKVNRWGPGRPPFRKAQSAACMEISLPVTTEESRENSYNRSRSSSISSIDKDSKE
AITALYFMESFARKNDSTISPCLFVGTSLGMVLIISLNLPSADEQRFTEPVMALPSGTFL
SLKGAVLTFSCMDRTGGLMQPPYEVWKDPNSTDENEKSWKRKLVMNFPSPSQETGDHQYT
IICSEKQAKVFSLPSQTCLYVHNITETSFILQADVVVMCNSACLACFCANGHIMIMSLPS
LRPMLDVNYLPLTDMRIARTFCFTNEGQALYLVSPTEIQRLTYSQEMCDNLQEMLGDLFI
PIETPEAQNRGFLKGLFGGSGQTFDREELFGEATAGKASRSLAQHIPGPGGIEGVKGAAG
GVMGELTRARIALDERGQRLGELEEKTAGMMTSAEAFSKHAHELMLKYKDKKWYQF
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaatttccgaaaagttttggatggcttaactgcctcctcccctggcagt
ggtagcagcagtggcggtaacagtggtggcggggctggaagtggttccgtgcatccagga
gggactgcaggggttctcagagaggagattcaggaaacccttacttcagagtatttccaa
atttgcaagacagttcgacatggttttccttatcagcccacagcactggcttttgaccca
gttcagaaaatcttggctattgggacgagaacaggtgctatacgaatacttgggagacct
ggtgttgattgttattgccaacatgagagtggtgcagcagtcctacaactccaattcttg
ataaatgagggtgctttggtgagtgcaagttcagatgatacacttcatttgtggaacctc
aaacaaaaaaggccagctattctgcattctcttaaattcaaccgagaacggttcttgagg
tgtgggagcttagttattgatttgagacttttcctcttttctaatagtaaatggctctat
gttggaacagaaagaggaaatacacatattgtaaatattgaatctttcattctttctgga
tatgttatcatgtggaacaaggcaattgaactatccacaaagactcatccaggtccagtt
gtacatttaagtgatagcccaagagatgaaggaaaactgctaataggttatgaaaatggt
actgtagtattctgggacttgaaatctaaaagagcagacctgagagtttattatgatgag
gctattcattcaattgattggcatcatgagggcaaacagttcatgtgcagccattcagat
ggcagcttgactttatggaacctgaaaagcccaagtcgtcctttccagacaacaattcca
catggaaaaagtccaagagaaggaagaaaatctgaatcatgtaaaccaattctcaaagta
gagtacaagacctgtaaaaatagtgaaccttttataatattttctggcggactgtcctat
gacaaagcttgcagaaaaccaagtttaaccatcatgcatggaaaagcaattacagtactt
gaaatggatcaccctattgttgaatttctaacgttatgtgaaacaccctatccaaatgaa
tttcaagaaccctatgctgttgcagtacttctggagaaagatctcattgtagttgatctg
acacaaagcaattttccaatctttgaaaatccatatcccatggacattcatgaatcacca
gttacatgtacagcatattttgctgattgccctccagatttgatactagtcctctactct
acaggagtcaagcataaaaaacaaggatacagtaataaggagtggccagtcagtggagga
gcttggaaccttggaacacaaacatttccagaaattattattactggccatgcagatgga
tcagtaaaattttgggatgcttctgcaataactttgcagatgctgtacaagttaaaaact
tcaaaagtatttgaaaaacagaagccaggagaaggaaaacagacatgtgaaattgtagag
gaagatccatatgccattcagatgatttactggtgtccagagagcagaatattctgtgta
tcaggagtctctgcatatgtcataatttataaattcagcaaacatgaaattacaacagaa
atagtgtcactagaagtacgtcttcagtgtgatgtggaagatattattacccctgaagca
gaaacaagtcctccattcccagatctctcatctcagcttccttcttcaagaagtctttct
ggaagtactaatactgtagaaagtgaaggagcaacgaaagatagtattccatgtctcaat
gttaagtctaaaccagtccgaatgcccccaggctatcaagcagaacttgttattcagctg
gtgtgggtggatggagaacctcctcaacagattactagtcttgctgtaaactcagcatat
ggcatagttgcatttggaaactgcaatggattggctgtggtggattttatacagaagaca
gtactgttaagcatggggaccattgacctatatagatcaagtgatctataccaacgacaa
ccaaggtctcctcgaaaaaacaagcagttcattgcagattctggtatgatatcacttcct
ttcactttagactatttctctctctttcctctgcctgctgctgatgctggtgctctggca
tgttccaaagacaacttttgcatgcgtggcctgtctaacttttatcctgatttaacgaaa
cggatccgtacttcctatcagagtttaaccgagctgaatgatggtccagtacccctggaa
cttgagcgctgcaaatctcccacttcaggacttgctaccagaactcctgatgcagcacca
ggtttttataggaatgacataccaactgtaagacagaggaatcaagtacatcacttgcca
gatcatgtaaatggacattgtacaagcccaactcagagttgtggttctggaaaacgtctt
tctagtgctgatgtttcaaaagtaaatcgctggggacccggaagaccaccatttcgaaaa
gcacagtcggctgcttgcatggaaatttcattaccagttacaacagaagaaagccgtgaa
aattcctataatcgttctagaagctctagcatctccagcattgacaaagattctaaagaa
gcaattacagcactatacttcatggaatccttcgctcgtaaaaatgactctactatctcc
ccctgtttgtttgttggaactagtttgggaatggttttaatcatctccttaaatctacct
tcagcggatgaacaaagatttacagaaccagtcatggcattaccaagtggtacattcctc
tccttgaaaggagctgtgttaactttctcctgtatggaccgaactggcggattaatgcag
ccaccatatgaagtttggaaggatccaaacagtaccgacgaaaatgaaaaatcttggaaa
aggaaactggttatgaacttcccctcgccatcacaagaaactggagatcatcagtataca
ataatatgctcagaaaaacaagccaaagtcttctcactgccttctcagacttgcctttat
gttcacaatatcactgagacatcttttatactacaagcagatgtggtggtcatgtgcaac
agtgcctgtttggcatgcttttgtgccaatgggcatatcatgataatgagcctccctagt
cttcgcccaatgttggatgtgaattatttgccactaacagacatgaggatagcacggaca
ttctgttttactaatgaaggacaggcactgtacctggtctctcctactgaaattcaacgg
ttaacatacagtcaagagatgtgtgacaatctacaggagatgctaggggatttgtttatt
cccatagagacaccagaagctcaaaatagaggatttctcaagggattgtttggtggaagt
ggacaaacatttgacagagaagagctctttggggaagctacagcaggaaaagcatcacgc
agccttgcacagcacattcccggacctggtgggatagaaggggtgaagggcgcggctgga
ggggtaatgggagagctgacccgtgcacggattgcgcttgacgagagaggacagaggcta
ggagagttggaagagaaaactgcaggaatgatgaccagcgcagaggcattttccaaacat
gcacatgagctaatgctgaaatataaggataagaaatggtaccaattctaa
DBGET
integrated database retrieval system
