Sorex fumeus (smoky shrew): 130018503
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Entry
130018503 CDS
T10594
Symbol
APP
Name
(RefSeq) amyloid-beta precursor protein isoform X1
KO
K04520
amyloid beta A4 protein
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04726
Serotonergic synapse
sfum05010
Alzheimer disease
sfum05022
Pathways of neurodegeneration - multiple diseases
Brite
Peptidases and inhibitors [BR:
sfum01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
130018503 (APP)
Proteoglycans [BR:
sfum00535
]
Cell surface proteoglycans
Others
130018503 (APP)
Glycosaminoglycan binding proteins [BR:
sfum00536
]
Heparan sulfate / Heparin
Others
130018503 (APP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130018503
NCBI-ProteinID:
XP_055965183
LinkDB
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Position
Unknown
AA seq
751 aa
AA seq
DB search
MLPALALVLLAAWTAWALEVPTDSNAGLLAEPQVAMFCGKLNMHMNVQNGKWEPDPSGTK
TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRGRKQCKTHAHIVIPYRCLVG
EFVSDALLVPDKCKFLHQERMDVCETHLHWHAVAKETCSKKSTNLHDFGMLLPCGIDKFR
GVEFVCCPLAEETDNIDSADAEEDDSDVWWGGADTDYTDGSDDKVVEVAEEEEVADVEEE
EAEDDEDDEEGDEVEEEAEEPYEEATERTTSIATTTTTTTESVEEVVREVCSEQAETGPC
RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCLAVCGSVIPTTAASTPDAVDKYL
ETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKV
ESLEQEAANERQQLVETHMARVEAMLNDRRRQALENYITALQAVPPRPRHVFNMLKKYVR
AEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQ
DEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVNGEFSLDDLQ
PWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVKMDAEFRHDA
GYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVD
AAVTPEERHLSKMQQNGYENPTYKFFEQMQN
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccgctttggcactggtcctgctggccgcctggacggcttgggcgctggaggtg
cccactgatagcaatgccggcctgcttgcagagccccaggtggccatgttttgtggcaag
ctgaacatgcacatgaacgtacagaatggcaagtgggagcctgatccctcggggaccaaa
acctgcattggcaccaaggagggcatcctacagtactgccaagaagtctaccctgaactg
cagatcaccaacgtggtggaagccaaccaacccgtgaccatccagaactggtgcaagagg
ggacgcaaacaatgcaagacccatgcccacattgtgatcccctaccgctgtctggttggc
gagtttgtaagcgatgcccttctcgttcctgacaagtgcaaattcttacaccaggagagg
atggatgtttgtgaaacccaccttcactggcacgctgtcgccaaagagacctgtagtaag
aagagtaccaacttgcatgactttggcatgttgctgccctgtggaatcgacaagttccga
ggggtggagtttgtgtgttgtccactggcagaggagacggacaatattgactcagcagat
gcagaagaggatgactcggatgtctggtggggtggagccgatacagactacacagatggc
agcgatgacaaagtagtggaagtagccgaggaagaagaagtggctgatgttgaggaagaa
gaagccgaagatgatgaggatgatgaggaaggggatgaggtggaggaagaagctgaggaa
ccctacgaagaggccaccgaaagaaccaccagcatcgccaccaccaccaccaccaccaca
gagtctgtggaagaggtggtccgagaggtgtgctccgaacaagccgagacggggccatgc
cgagcaatgatctcccgctggtactttgatgtgactgaagggaagtgcgcccccttcttt
tacggcggatgtggcggcaaccgaaacaactttgacacagaggagtactgcctggccgtg
tgtggcagcgtcattcccaccaccgcagccagcacccctgacgctgttgataagtatctt
gaaacacctggagatgagaatgaacacgcccatttccagaaagccaaagagaggctggaa
gccaagcaccgtgagagaatgtcccaggtcatgagagaatgggaggaagcagaacgtcaa
gccaagaacttgccaaaagctgataagaaagcagttatccagcacttccaggagaaagtg
gaatctctggagcaggaagccgccaatgagagacagcagttggtggagacacacatggcc
agagtggaagccatgctcaatgaccgccgccgacaggctctggagaactacatcactgcc
ctgcaggccgtgccacctcggccacgtcatgtgttcaacatgctaaagaaatatgtccgt
gctgagcagaaagaccggcagcataccctgaagcattttgagcatgtccgcatggtggac
cccaagaaagccgctcagattcgctcccaggtgatgactcacctccgtgtgatttacgaa
cgcatgaaccagtctctgtctctgctctacaatgtaccagcagtggccgaggagattcag
gatgaagttgatgagctgcttcagaaagagcaaaattactcggatgacgtcttggccaac
atgatcagtgaaccaagaatcagctacggaaatgatgcacttatgccgtctttgactgag
acgaaaaccactgtggagcttcttccggtcaatggagagtttagcctggacgacctccag
ccatggcatccatttggggtcgactccgtgccagccaatacagaaaatgaagttgagcct
gttgacgcccgccctgctgccgaccgaggactgaccactcgaccaggttcgggattgaca
aatatcaagacagaagagatctcggaagtgaaaatggatgctgagttccgacacgacgca
ggatatgaagttcatcatcagaagctggtattctttgcagaagatgtgggttcaaacaaa
ggtgccatcattggactcatggtgggcggtgttgtcatagcaacagtgattgtaatcacc
ttggtgatgctgaagaagaaacaatacacatccatccatcacggcgtggtggaggtcgac
gccgccgtgacccccgaggagcgtcatctctccaagatgcagcagaacggctacgaaaac
ccaacttacaaattcttcgagcagatgcagaactag
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