KEGG   Sorex fumeus (smoky shrew): 130018546
Entry
130018546         CDS       T10594                                 
Symbol
SCAF4
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
  KO
K13167  SR-related and CTD-associated factor 4
Organism
sfum  Sorex fumeus (smoky shrew)
Brite
Transcription machinery [BR:sfum03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     130018546 (SCAF4)
Spliceosome [BR:sfum03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   SR proteins
    130018546 (SCAF4)
SSDB
Other DBs
NCBI-GeneID: 130018546
NCBI-ProteinID: XP_055965256
LinkDB
Position
Unknown
AA seq 1149 aa
MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKISSEPPQATTNSVPAVPQLP
SSDAFAAVAQLFQSTQGQQLQQILQTFQQPPKPQSPAIDNAVMAQVQAMTAQLKTAPTQP
PEQKAAFPQPEQKTAFDKKLLDRFDYDDEPEAMEESKKEDAAAGTVPVAAAPPIPPAMPA
AAAATPATSPPQAPFGFPGDGMQQPAYPQPQTMEQFQPRLMPMQQDPVHHQVPLPPNGQM
PGFGLLPTPPFPPMAQPVIPPTPPVQPPFQASFQAQNEPLTQKAHQEMEVEQPCIPEVKR
HISDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREK
ERERRQKGLPQIKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIEAINMIPPRGCA
YIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYVPWDK
VKPEELESFCEGGMLDSDTLNPDWKGIPKKPENEVAQNGGAEPSHTEPVSPVPKPLPVPV
PPMPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPMGIPPPGFGPGVPPPPPPPPFLR
PGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIP
TVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVGPGPVIGLQAPS
TGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFGMPPPHGMK
GPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQPPPQQQPPPPQPPQQPPQQQPPQQQ
QQQQQQQQQPPPAQQPPPTQPQPQAFRNDSRQQFNSGRDQDRFGRRSFGNRVENDRDRYG
SRNDDRENSTRERREWGRRSPDRDRHRDLDERNRRCSGHRDRERDSRDRESRREKEENRG
KEKLEVTDRAGGNKTLEPPASQVGPVNPLPELAKGESEPAGVKPAEELPAAATSSMDPEK
NSGSAEAPR
NT seq 3450 nt   +upstreamnt  +downstreamnt
atggacgccgtcaacgccttcaaccaggagctcttttcacttatggatatgaaacctccc
atctctcgagccaagatgatactcatcacaaaagctgctattaaggctattaagctttat
aagcatgtagttcaaatagtagaaaagttcatcaaaaagtgtaaaccagaatacaaagtt
ccgggattatacgttattgactcaattgtacgacagtctcgtcatcaatttggaactgat
aaagatgtttttgggccaagattctctaaaaacataaccgccacattccaatatttatat
ctttgtccgtctgaagataagagtaaaatagttcgtgtgctaaacctgtggcaaaaaaat
ggagtgttcaaaattgaaattattcagcctcttttggacatggcagcaggaaccagtaat
gctgccccagtagcagaaaatgtgacgaataatgaaggctcacctccacctccagttaaa
atttcttctgaacccccacaagccactacgaactctgtaccagctgtaccacagctgcca
agctctgatgcctttgctgctgtggctcaactgtttcagtcaacgcaagggcaacagctt
caacagattcttcagacttttcaacaacccccaaaaccacagtctcctgccattgacaat
gctgtgatggctcaggttcaggccatgacagctcagttaaagacagctcctacacaacca
cctgagcaaaaagctgctttcccccagcctgaacaaaaaactgcgtttgacaagaagcta
cttgatagatttgattatgacgatgagccagaagctatggaagagtcaaagaaagaagac
gctgctgccggcactgtgcccgttgctgctgcccctcctattcctcctgccatgcccgct
gctgccgccgccacacctgccacttctcccccacaagcaccctttggatttcctggagat
ggcatgcagcagccagcatacccacagccacagactatggagcagtttcagcctcgactg
atgccgatgcagcaggatccagtgcaccatcaggttccacttcctcctaatggacagatg
ccagggtttggccttcttccaacgcctccatttcctcccatggctcagcctgtgattcct
cctactccacccgtgcaaccacctttccaggcttcttttcaagcacagaatgaaccactt
acacagaaggcacatcaggaaatggaagtggaacagccttgtattccagaggttaaacgg
catatatctgataacagaaagtcgagatcaaggtcagcatcgaggtcaccaaaaagaaga
cggtctcgatcaggttctagatcaagaaggtctcggcatcgacgttctagatctcgatcc
agggacagacgcagacattctcctagatctcgatcccaagagagacgggatcgagaaaaa
gaaagagaacgccggcagaaaggcctccctcagatcaaaccagaaactgctagtgtgtgt
agcactacactctgggtaggacagctggacaaaaggactacccagcaggatgttgccagt
ctcttggaagagtttggtcctattgaagcaattaacatgattcctcccagaggttgtgcc
tacattgttatggttcataggcaagacgcttatcgcgccctgcagaaactgagccgagga
aattacaaagtgaaccaaaaatctataaagattgcctgggccttaaacaaaggaataaag
gcagattataagcagtattgggatgtagaacttggtgttacgtatgttccatgggacaaa
gtcaagcctgaagaactggagagtttctgtgaaggaggaatgttagacagtgatacactt
aatccagattggaaaggaattccaaaaaaacctgaaaatgaggttgctcagaatggagga
gcagaaccttctcacacagaaccagtatcacctgtccctaaacctttacctgtgcctgtc
cctcctatgccagttcctgcacctatcacagtacctcctccacaggtcccaccacatcag
ccaggcccacctgtcgtcggtgctctccagccacctgctttcacgcctcctatgggaatt
ccccctcctggctttggtcctggtgtccctcctccaccaccacctccaccatttttgcgc
ccaggatttaatccaatgcatttgccaccaggttttctccctcctggacccccacctcct
ataactccaccagtatccattcctcctcctcacactccaccaataagcatcccaaactcc
actatcgctggtataaatgaagacactacaaaagacttatctattggaaatcccattcca
acagtggtatctggggctagaggaaacgccgagtctggtgacagtgtgaaaatgtatggc
tctgccgtgccacctgccgcacccacgaatctgcctacccctcctgtaacccagcctgtt
tcacttcttggtacccaaggagttggccctggtcccgtcattggtctccaagccccatcc
accggtcttctcggcgcccggcccggcctgatcccactccagcgccctccaggaatgcct
ccccctcacttgcagcgtttccctttgatgccacctcgtcccatgccgccacatatgatg
catcgaggtccacccccgggacccgggggcttcggaatgccaccccctcatggaatgaaa
gggcccttcccaccacatggccctttcgtcaggccgggtggcatgccagggctcggaggc
ccagggcccggccctgggggtcctgaagatcgcgacggaaggcagccccctccccaacag
cagccaccaccaccacagccaccgcagcagccgccgcagcagcagccaccacaacagcag
cagcagcaacagcagcagcagcagcagccgccgccagctcagcagcctccgccgacgcag
ccccagccccaagcgtttcggaatgatagcaggcagcagttcaattcaggtagagaccaa
gacaggttcggaagaagatcattcggaaatagggtggaaaatgaccgggaccggtacggg
agccggaacgatgatagagagaatagcacgcgggagaggagagagtggggaaggaggagc
cccgaccgggacaggcacagagacttggacgagagaaatagacgctgtagcgggcaccga
gacagagagagagattccagggatagagagtcgcgtagagagaaggaagagaaccgaggg
aaggagaagctggaggtgacagacagggcgggtggtaacaaaacccttgaacctcccgct
agccaagtgggccctgtcaaccctctccctgaactggctaaaggggagtctgagcctgcg
ggtgtcaaacccgccgaagagcttcctgctgcggctacctcgtccatggaccctgagaag
aattctggctcagcagaagctcctcgttag

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