Sorex fumeus (smoky shrew): 130018562
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Entry
130018562 CDS
T10594
Symbol
RUNX1
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04530
Tight junction
sfum04659
Th17 cell differentiation
sfum05200
Pathways in cancer
sfum05202
Transcriptional misregulation in cancer
sfum05220
Chronic myeloid leukemia
sfum05221
Acute myeloid leukemia
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130018562 (RUNX1)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
130018562 (RUNX1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
130018562 (RUNX1)
05202 Transcriptional misregulation in cancer
130018562 (RUNX1)
09162 Cancer: specific types
05221 Acute myeloid leukemia
130018562 (RUNX1)
05220 Chronic myeloid leukemia
130018562 (RUNX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130018562 (RUNX1)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
130018562 (RUNX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Runt
RunxI
TagH_SH3-like
Motif
Other DBs
NCBI-GeneID:
130018562
NCBI-ProteinID:
XP_055965286
LinkDB
All DBs
Position
Unknown
AA seq
454 aa
AA seq
DB search
MRIPVDASTSRRFTPPSTALSPGKMSEALPLGAPDAGAALAGKLRSGDRSMVEVLADHPG
ELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNA
TAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRRHR
QKLDDQTKPGSLSFSERLSELEQLRRSAMRGSPHHPAPTPNPRASLNHSTAFNPQPQSQM
QDTRQIQPSPPWSYDQSYQYLGSIASPSVHPATPISPGRASGMTTLSAELSSRLSTAPEL
SAAFGDPRQFSTLPTISDPRMHYPGAFTYSPTPVTSGIGIGMSAMSSATRYHTYLPPPYP
GSSQAQGGPFQASSPSYHLYYGASAGSYQFSMVGGERSPPRILPPCTNASTGSALLNPSL
PNQSDVVEAEGSHSNSPTNMAPAARLEEAVWRPY
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatccccgtagatgccagcacgagccgccgcttcacgccgccgtccaccgcgctg
agcccgggcaagatgagcgaggcgctgccgctgggcgctccggacgccggcgccgccctg
gccggcaagctgaggagcggcgaccgcagcatggtggaggtgctggccgaccaccccggg
gagctggtgcgcaccgacagccccaacttcctctgctccgtgctccccacgcactggcgc
tgcaacaagaccctgcccatcgctttcaaggtggtggctctgggggatgttcccgatggt
actttggtcacggtcatggcaggcaatgatgaaaactattcggccgaattaaggaatgct
actgcagccatgaaaaaccaagttgccagattcaatgacctcaggtttgtcggtcgaagc
ggaagagggaagagcttcactctcaccatcaccgtcttcaccaacccaccacaagtggcc
acctaccaccgggccatcaaaatcaccgtggatggaccccgagaacctcgaagacatcgg
cagaaactagatgatcagaccaagcccgggagcttgtccttttccgagcggctcagtgaa
ctggaacagctgcggcgctcagccatgaggggcagcccacaccacccagcccccacaccc
aaccctcgggcctccttgaaccactccactgcctttaaccctcagcctcagagtcagatg
caggatacaaggcagatccagccgtccccaccgtggtcctacgatcagtcttaccagtac
ctgggatccatcgcttccccttcggtccacccagcaacgcccatctcgcctggaagggcc
agtggcatgacaaccctctctgcagagctttccagtcgactctcaactgcacccgaactc
tcagccgccttcggcgacccgcggcagttctccacgctgcccaccatctccgacccccgc
atgcactaccccggcgctttcacctactccccgacgcctgtcacttccggcatcggcatc
ggcatgtcggccatgagctcggccacgcgttaccacacctacctgccgccgccttacccc
ggctcgtcgcaggcgcagggcggcccgttccaggccagctcgccttcctaccacctctac
tacggcgcctcggccggctcctaccagttctccatggtgggcggcgagcgctccccgccg
cgcatcctgccgccctgcaccaacgcctccacgggctcggcgctgctcaaccccagcctc
ccgaaccagagcgacgtggtggaggccgagggcagccacagcaactcgcccaccaacatg
gcgcccgccgcgcgcctcgaggaggccgtgtggcggccatattga
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