Sorex fumeus (smoky shrew): 130018611
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Entry
130018611 CDS
T10594
Symbol
EXOSC8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130018611 (EXOSC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfum03019
]
130018611 (EXOSC8)
Messenger RNA biogenesis [BR:
sfum03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
130018611 (EXOSC8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
SUKH-3
Motif
Other DBs
NCBI-GeneID:
130018611
NCBI-ProteinID:
XP_055965374
LinkDB
All DBs
Position
Unknown
AA seq
276 aa
AA seq
DB search
MAAGFKTVEPLEYYRRFLKENCRPDGRELGEFRATTVNIGSISTADGSALVKLGNTTVIC
GIKAEFAAPPADTPDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFVADVIENSQIIQ
KEDLCISPGKLAWVLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVN
LKKKHFLNIKTHPIATSFAVFDDTLLIVDPTGEEEHLATGTLTVVMDEEGKLCCLHKPGG
SGLTGAKLQDCMSRAVTRHKEVKKLMDEVTKSIKVK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgggttcaagaccgtggagcccctggagtactacaggagatttctgaaagag
aactgccgtccggatgggagggaacttggtgaattcagagccacaaccgtcaacataggt
tcaattagtactgcagatggttctgctttagtgaagttgggaaatactacagtaatttgt
gggattaaagcggaatttgcagcaccaccagctgatacccctgataaaggctatgttgtg
cctaatgtcgacctgccacctctgtgttcatcaagatttcgatcaggacctcctggtgaa
gaggcccaagttgctagccagtttgttgcagacgtcattgaaaattcacagattattcag
aaagaggacttatgcatttctccaggaaagcttgcatgggttctatactgtgatctcatt
tgcctcgactatgatggaaacattttagatgcctgtacatttgctctgttagcggctttg
aaaaatgtacagttgcctgaagttactataaatgaagaaactgccttagcagaagttaat
ttaaagaagaaacattttttgaatattaaaactcatccaattgcaacttcttttgctgta
tttgatgacactctgctcatagttgatcccactggagaggaagaacatctggcaactgga
accttgacagtagtaatggatgaggaaggcaaactatgttgtcttcataaaccaggtggc
agtgggctgaccggagctaaacttcaggactgtatgagcagagcagttacaagacacaaa
gaagtaaaaaaactgatggatgaagtaactaagagtattaaagtcaaatga
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