Sorex fumeus (smoky shrew): 130018871
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Entry
130018871 CDS
T10594
Symbol
TUBB4A
Name
(RefSeq) tubulin beta-4A chain
KO
K07375
tubulin beta
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04145
Phagosome
sfum04540
Gap junction
sfum04814
Motor proteins
sfum05010
Alzheimer disease
sfum05012
Parkinson disease
sfum05014
Amyotrophic lateral sclerosis
sfum05016
Huntington disease
sfum05020
Prion disease
sfum05022
Pathways of neurodegeneration - multiple diseases
sfum05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130018871 (TUBB4A)
09144 Cellular community - eukaryotes
04540 Gap junction
130018871 (TUBB4A)
09142 Cell motility
04814 Motor proteins
130018871 (TUBB4A)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130018871 (TUBB4A)
09164 Neurodegenerative disease
05010 Alzheimer disease
130018871 (TUBB4A)
05012 Parkinson disease
130018871 (TUBB4A)
05014 Amyotrophic lateral sclerosis
130018871 (TUBB4A)
05016 Huntington disease
130018871 (TUBB4A)
05020 Prion disease
130018871 (TUBB4A)
05022 Pathways of neurodegeneration - multiple diseases
130018871 (TUBB4A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfum03036
]
130018871 (TUBB4A)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfum04812
]
130018871 (TUBB4A)
04147 Exosome [BR:
sfum04147
]
130018871 (TUBB4A)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
130018871 (TUBB4A)
Cytoskeleton proteins [BR:
sfum04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
130018871 (TUBB4A)
Exosome [BR:
sfum04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130018871 (TUBB4A)
Exosomal proteins of colorectal cancer cells
130018871 (TUBB4A)
Exosomal proteins of bladder cancer cells
130018871 (TUBB4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
130018871
NCBI-ProteinID:
XP_055965525
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEGEFEEEAEEEVA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagatcgtccatctgcaggccggccagtgcggcaaccagatcggggccaagttc
tgggaggtcatcagtgacgagcacggcatcgaccccaccggaacgtaccacggggacagc
gacctgcagctagagagaatcaatgtctactacaacgaggccacgggaggaaattatgtc
cccagagcggtgctggtggacctggaaccgggcaccatggactcggtgcgctcaggcccc
ttcggccagatcttcaggcctgataactttgtgtttggccagtctggagccggtaacaac
tgggccaagggccactacacggagggcgcggagctggtggacgccgtcctggacgtggtg
cgcaaggaggccgagagctgcgactgtctgcagggctttcagctcacccactccctgggt
gggggcacgggctcgggcatgggcacactcctcatcagcaagatccgggaggagtttccc
gaccgcatcatgaacaccttcagcgtggtgccgtcgcccaaggtctcggacacggtggtg
gagccctacaacgccaccctgtcggtgcaccagctggtggagaacacggatgaaacgtac
tgcatcgacaacgaggcgctgtacgacatctgcttccgcaccctcaagctcaccacgccc
acctacggggacctcaaccacctggtgtcggccaccatgagcggggtcaccacctgcctg
cgcttccccgggcagctcaacgccgacctgcgcaagctggccgtgaacatggtgcccttc
ccacgcctgcatttcttcatgcccggctttgcacccctgaccagccggggcagccagcag
taccgggccctgacggtgcccgagctcacccagcagatgttcgacgccaagaacatgatg
gcagcgtgcgacccccgccacggccgctacctgaccgtggccgccgtcttccgtggccgc
atgtccatgaaggaggtggacgagcagatgctgagcgtccagagcaagaacagcagctac
ttcgtcgagtggatccccaacaacgtgaagacggccgtgtgcgacatccccccgaggggc
ctgaagatggcagccaccttcatcggcaactccacggccatccaggagttgttcaagcgc
atctccgagcagttcacggccatgttccgccgcaaggccttcctgcactggtacacgggc
gagggcatggacgagatggagttcaccgaggccgagagcaacatgaacgacctggtgtcc
gagtaccagcagtaccaggatgccacggccgaggagggcgagttcgaggaggaggccgag
gaggaggtggcctag
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