Sorex fumeus (smoky shrew): 130019023 Help Entry 130019023         CDS       T10594                                  Symbol TNR Name (RefSeq) tenascin-R   KO K06252   tenascin Organism sfum  Sorex fumeus (smoky shrew) Pathway sfum04151   PI3K-Akt signaling pathway sfum04510   Focal adhesion sfum04512   ECM-receptor interaction sfum04518   Integrin signaling sfum05165   Human papillomavirus infection sfum05206   MicroRNAs in cancer Brite KEGG Orthology (KO) [BR:sfum00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     130019023 (TNR)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     130019023 (TNR)    04518 Integrin signaling     130019023 (TNR)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     130019023 (TNR)  09160 Human Diseases   09161 Cancer: overview    05206 MicroRNAs in cancer     130019023 (TNR)   09172 Infectious disease: viral    05165 Human papillomavirus infection     130019023 (TNR)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:sfum00536]     130019023 (TNR) Glycosaminoglycan binding proteins [BR:sfum00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    130019023 (TNR) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Fibrinogen_C fn3 FN3_DSCAM-DSCAML_C Pur_ac_phosph_N Fn3_Dep-1_3rd FN3_Tor_3rd Fn3_VIN3 Glyco_hydro_1 Motif Other DBs NCBI-GeneID:  130019023 NCBI-ProteinID:  XP_055965621 LinkDB All DBs Position Unknown AA seq 768 aa AA seqDB search TRHEIDAPKNLRVAARTATSLHVAWDNSEAEAQAYRLVYSTLAGEQYHEMLVPKAPGPAS SVTLTDLIPGTEYGLGISALMNSRQSVPATMNARTELDGPRDLTVRASSETSISLLWTKA AGPIDHYRITFTPSSGVASEVTVPRHVTAYTLTDLEPGAEYMISVTAERGRQQSPEATVD AFTGFRPISHLHFSHVTSSGVNITWSDPSPPPDRLVLSYSPRDREEETRELALEAARRHA VLTGLLPATEYTVSLVAVHGAARSEPIVGSVTTGIDPPRDITIGNVTKDSVVVSWSPPIA AFDYYRVSYRPTQVGRLDSSVVPNTVREFTITRLHPATEYEISLNSVRGREESERVCTLT HTALDSPSELTATNVSPTEALLQWRAPVGEVENYVIVLTHFAVAGETILVDGSREELQLV DLLPRTRYTASLYATSGPLASDTISTNFSTLLDPPTNLTASEVTRQSVLVSWVPPRAAIE NYVLTYKAADGSRKELMVDAEDTWVRLEGLQERTDYTVLLQAAQLGERSRVTSTAFSTGG RVFPHPQDCAQHLGNGDTLSGVYTIFLHGEPSQKLQVYCDMATDGGGWTVLQRRQNGQTD FFRKWAEYRAGFGNLEDEFWLGLDNIHRITSQGRYELRVDMRDNQEAVFAVYDRFLVEDG RSLYKLRLGAYNGTAGDSLSYHQSRPFSTQDRDNDVAVTNCAVSYKGAWWYKNCHRANLN GKYGESRHSQGINWYHWKGHEFSIPFVEMKTRPFGHREAGRRRRSLWV NT seq 2307 nt NT seq  +upstreamnt  +downstreamnt actcggcacgagatcgatgcgcccaagaacctgcgtgtggccgcccgcacggccaccagc ctgcacgtggcgtgggacaacagtgaggcagaagctcaggcctataggctggtctacagc acgctggccggagaacagtaccacgagatgctggtccccaaggccccgggacccgccagc agcgtcacgctgaccgatctgatccctggcaccgagtacgggctgggcatctccgccctc atgaactcccggcagagcgtgccggccaccatgaacgccaggacggaactggacggtccc cgggacctgacggtgagggcctcgtcggagacgtccatctccctcctgtggaccaaggcc gccggccccatcgaccactaccggatcaccttcacgccgtcctcgggcgttgcctcggag gtgaccgtgccccggcacgtgaccgcgtacaccctgacggacctggagcccggggccgag tacatgatctccgtcaccgccgagcgcggccggcagcagagcccggaggccactgtggac gcgttcacaggattccgtcccatctcccacctgcacttctcgcatgtgacctcctcgggt gtgaacatcacctggagtgacccctccccgccacctgaccggctggtcctcagctacagc ccccgggaccgcgaggaggagacgcgggagctggcgctggaggcggcccggaggcatgca gtgctgaccgggctgctgcccgccaccgagtacaccgtcagcctagtggccgtgcacggc gccgcccgctccgagcccatcgtgggctccgtcaccacaggcatcgacccccccagggac atcaccatcggcaacgtgaccaaggactcggtcgtggtgtcctggagtcccccgatcgcc gcctttgactactaccgcgtctcctaccggcccacgcaagtgggccggctggacagctcc gtggtgcccaacacagtgcgcgagttcaccatcaccaggctgcaccccgccaccgagtac gagatcagcctgaacagcgtgcgcggccgtgaggagagcgagcgcgtgtgcaccctcacg cacacagccctggacagcccctcggagctgaccgccaccaacgtcagccccacggaggcg ttgctgcagtggcgggcgcccgtcggggaggtggagaactacgtcatcgtcctcacccac ttcgcagtggccggggagaccatcctggtggacgggagccgcgaggagctgcagctggtg gacttgctgccccggacccgctacacggcctccctgtacgccaccagcgggccactcgcc agcgacaccatcagcaccaacttctccacgctcctggacccgcccaccaacctgacggcc agcgaggtcacccggcagagcgtcctggtgtcctgggtgcccccccgggccgccatcgag aactacgtcttgacctacaaagccgcggacggaagccgcaaggagctgatggtggacgca gaggacacgtgggtgcgcctggagggcctccaggagaggacggactacacggtgctgctc caggccgcccagctcggcgagcgtagccgtgtcacctccacagccttcagcacgggaggc cgggtgttcccgcacccgcaggactgtgcccagcacctgggcaacggagacaccctcagt ggggtctacaccatctttctccacggcgagcccagccagaagctgcaggtgtactgtgac atggccaccgatgggggcggctggaccgtgctccagcggcggcagaacgggcagacggat ttcttccgcaagtgggctgagtaccgcgcgggcttcgggaacctggaggacgagttctgg ctggggctggacaatatccacaggatcacgtcccagggccgctacgagctgcgtgtggac atgcgggacaaccaggaggccgtgttcgccgtgtacgaccgtttcctggtggaggacggc cgaagcctttacaagctgaggttgggcgcctacaacggcaccgcaggggactccctaagc taccaccagagccgccccttctccacgcaggaccgggacaatgacgtggccgtcaccaac tgcgccgtgtcctacaagggcgcctggtggtacaagaactgccatcgggccaacctcaac ggcaagtacggcgagtcccggcacagccagggcatcaactggtaccactggaagggccac gagttctccatcccgttcgtggagatgaagacgcggccgttcgggcatcgggaggccggg cggcgccgccggtccctgtgggtctga

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