Sorex fumeus (smoky shrew): 130019179
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Entry
130019179 CDS
T10594
Symbol
GPC6
Name
(RefSeq) glypican-6 isoform X1
KO
K08112
glypican 6
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sfum00535
]
130019179 (GPC6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sfum00537
]
130019179 (GPC6)
Proteoglycans [BR:
sfum00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
130019179 (GPC6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sfum00537
]
Others
130019179 (GPC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glypican
Motif
Other DBs
NCBI-GeneID:
130019179
NCBI-ProteinID:
XP_055965764
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MPSWIGAVILPLSGLLLALPARADLKARSCGEVRQAYGAKGFSLVDIPYQEIAGEHLRIC
PQEYTCCTTEMEDKLSQQSKLEFENLVEETSHFVRTTFVSRHKKFDEFFRELLGNAEKSL
NDMFVRTYGMLYMQNSEVFQDLFTELKKYYMGGNVNLEEMLNDFWARLLERMFQLINPQY
HFSEDYLECVSKYTDQLKPFGDVPRKLKIQVTRAFIAARTFVQGLTVGREVANRVSKVSP
TPGCIRALMKMLYCPYCRGLPAVRPCNNYCLNVMKGCLANQADLDTEWNLFIDAMLLVAE
RLEGPFNIESVMDPIDVKISEAIMNMQENSMQVSAKVFQGCGQPKPAPALRSARSAPENF
NTRFRPYNPEERPTTAAGTSLDRLRIVWRTMQHSVTDIKEKLKLSKKVWSALPYTICKDE
SVTAGTSNQEECWNGHSKARYLPEIMNDGLTNQINNPEVDVDITRPDTFIRQQIMALRVM
SNKLKNAYNGNDVNFQDTSDESSGSGSGSGCMDDVCPTEFEFVTTEAPAVDPDRREVDSS
ATRLGLSLLSGFLVCMVLTLQRLGR
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgccttcttggatcggggctgtgattcttcccctctccgggctgctgctggccctgccg
gcccgggcggacctgaaggcgaggagctgcggcgaggtccgccaggcgtacggtgccaag
ggattcagcctggtggacattccgtaccaagagatcgcaggggaacacttaagaatctgt
cctcaagaatatacatgctgcactacagaaatggaagacaagctgagtcagcagagcaaa
ctggagtttgaaaacctggtggaggagacgagccattttgtgcgcaccaccttcgtatcc
aggcacaagaaatttgatgaatttttccgagagctcctggggaatgcagaaaagtcactg
aatgatatgtttgtacggacttatggcatgctctacatgcagaattcagaagtatttcag
gacctgtttacagagctgaagaagtactacatggggggcaatgtgaatctggaagagatg
ctcaatgacttttgggctcggctcctggaacggatgttccaactcataaacccacagtat
cacttcagtgaggactatctggaatgcgtcagcaaatacacagaccagctgaaacctttt
ggagatgtgccccggaagctgaaaatccaggtcacccgcgccttcattgctgcccggaca
ttcgtccaagggctgactgtgggcagagaagtagcaaaccgagtttccaaggtcagcccg
acccccgggtgcatccgggccctcatgaagatgctatactgtccatattgcagaggtctt
cctgctgtgaggccatgcaacaattactgcctcaatgtcatgaagggctgtttggcgaac
caggcagatcttgacaccgagtggaacctgtttatagatgcaatgctcttggtggctgag
cgcctggaaggaccgttcaacattgagtcagtcatggaccctatagatgtcaagatctcc
gaagccattatgaacatgcaagaaaacagcatgcaggtgtctgcaaaggttttccaggga
tgtggtcaacccaaaccagctccagcactgagatctgcccgttctgctccagaaaatttt
aatacgcggttcaggccatacaatcccgaagaaagaccaacaactgctgcaggaacgagc
ttggaccggctgaggattgtgtggaggacaatgcaacatagtgtcactgacatcaaagag
aaactgaagctctctaaaaaagtctggtcagcgcttccctacaccatctgcaaggacgag
agcgtgacggcaggcacgtccaaccaggaggagtgttggaacggccacagcaaagccagg
tacttgcctgagatcatgaacgatggactgaccaaccagatcaacaatcctgaggtggac
gtggacatcacccgccctgacaccttcatcaggcagcagatcatggctctgcgtgtgatg
tcgaacaaactaaagaatgcgtacaatggaaacgacgtcaacttccaggacacaagtgat
gaatccagcggctccggcagcggcagcgggtgcatggacgacgtatgtcccacagagttt
gagtttgtcaccaccgaggcccctgcagtggatcccgaccggagagaagtggactcctcc
gctacccggctgggtctctcattgctctcaggctttctcgtctgcatggtcttgacactg
cagagactgggcagataa
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