Sorex fumeus (smoky shrew): 130019180
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Entry
130019180 CDS
T10594
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03410
Base excision repair
sfum04140
Autophagy - animal
sfum04217
Necroptosis
sfum04613
Neutrophil extracellular trap formation
Brite
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
130019180 (HMGB1)
DNA repair and recombination proteins [BR:
sfum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
130019180 (HMGB1)
MMR (mismatch excision repair)
Other MMR factors
130019180 (HMGB1)
Exosome [BR:
sfum04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
130019180 (HMGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130019180
NCBI-ProteinID:
XP_055965766
LinkDB
All DBs
Position
Unknown
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDVAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattctttgtg
caaacttgccgggaggagcacaagaagaagcacccagatgcttccgtcaacttttcagag
ttttctaagaagtgttcagagaggtggaagactatgtctgctaaagagaaaggaaaattt
gaagacatggcaaaggctgacaaggcccgttacgaaagagaaatgaaaacttatatccct
cctaaaggggaaacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccttcg
gcctttttcttgttttgttctgagtatcgcccaaaaatcaaaggagagcatcctggcctg
tctattggtgacgttgcaaagaaactgggagagatgtggaacaacactgctgcagatgac
aagcagccttacgagaagaaggctgccaagctgaaggagaaatacgaaaaggatattgct
gcataccgagctaaaggaaagcctgatgtggccaagaagggagttgttaaagctgaaaag
agcaagaaaaagaaggaagaggaggaagatgaagaggatgaagaggatgaggaagaagag
gaggatgaagaagacgaagatgaagaagaggatgatgatgatgaataa
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integrated database retrieval system
