Sorex fumeus (smoky shrew): 130019797
Help
Entry
130019797 CDS
T10594
Symbol
CLASP1
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfum03036
]
130019797 (CLASP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfum04812
]
130019797 (CLASP1)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
130019797 (CLASP1)
Cytoskeleton proteins [BR:
sfum04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
130019797 (CLASP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
TOR1L1_N
Sec7-like_HUS
Cnd1
HEAT_2
RTP1_C1
HEAT_DAAF5
MMS19_N
ParcG
MMS19_C
KH_DEAH11_1st
TAN
Motif
Other DBs
NCBI-GeneID:
130019797
NCBI-ProteinID:
XP_055966420
LinkDB
All DBs
Position
Unknown
AA seq
1575 aa
AA seq
DB search
MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN
SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMD
QAANPQYVWDRMLGGFKHKNFRTREGTCLCLVATLNASGAHTLTLNKIVPHICNLLGDPN
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN
FDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTRRLGSSSLGSKSSAAKEGAGAVDEE
DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRGSTVSTKSAATTGSLQRSRS
DIDVNAAASAKSKVSSVPGSTPFSSAAALPPGSYASLDGTATKAEGRIRTRRQSSGSATN
VASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLSGSSSRGPPVTP
SSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFPP
LASRRHSRSTSALSTAESVGQSDRFGLGQAGRIPGSVNAMRVLSTSTDLEAAVADALLLG
DSRSKKKPVRRRYEPYGMYSDDDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNH
CASSNWSERKEGLLGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKVFSMFLETLVDF
IIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIV
DQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQ
IVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNTSVSSPSNTIGRTPSRHT
SSRTSPLTSPTNCSHGGLSPSRLWGWSADGLSKHPPPFSQPNSIPTAPSHKTLRRSYSPS
MLDYDTENLNSEEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKDCDIVSRDGGVAPL
PPEGRGGSDVVEGGRTALDNKTSLLNTQPPRAFPGPRAREYNPYPYSDTINTYDKTALKE
AVFDDDMDQLRDVPIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDSLGVWEEH
FKTILLLLLETLGDKDHSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEV
VRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKVVERIAKDSLLQLLA
DIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPHLAQLTGSKMKLLNLYIKRAQT
TNSNSSSSSDVSTHS
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atggaacctcgcatggagtcctgcctggcacaggtgttgcagaaggatgtggggaagcgg
ctgcaggtcggccaggaacttatagactatttctcagacaaacagaagtctgctgacctt
gagcatgaccagaccatgttagataaacttgtggatggacttgctacctcttgggtgaac
tctagcaattacaaggtggttcttctgggcatggacatcctgtcggcactggtcacccgg
ctgcaggatcggttcaaggcgcagattggcacagtgctgccaagtttaatagaccgactg
ggggatgctaaagactccgtgagggaacaagaccaaactctgctgctgaagatcatggat
caagctgctaatccccagtacgtgtgggatcgaatgctcggaggctttaaacacaagaat
ttccggactcgggaaggcacgtgtctctgtcttgtcgccacactcaatgcctctggagca
catactttaacactaaacaagatagtgccacatatatgtaacttacttggagatcccaat
agccaggttcgggacgcagcaataaacagcttagtggaaatttacagacatgtaggagaa
cgtgtgagggcagatctcagtaaaaaaggattaccacagtctcggttgaatgtgattttt
acaaaatttgatgaagtccaaaaatctgggaatatgatacaatctgcaaatgataaaaat
tttgatgatgaagattctgtagatggtaacagaccgtcctctgctagttctacatcttcc
aaagctccaccgagctctcggagaaacgttggaatggggaccacccgccggcttggatct
tcctctcttggctccaagtcttccgctgcaaaagaaggagctggtgctgtcgatgaggag
gactttattaaagcgtttgatgatgtacctgtggtgcagatttattccagccgagacctt
gaggaatccataaacaagatcagggaaatactgtctgatgacaagcatgattgggaacaa
agagtaaatgctctaaagaagatcagatctttacttttggctggtgctgctgaatacgat
aacttctttcaacatttgcgtcttctggatggagccttcaaactctctgctaaggacctg
cgctctcaggtcgtgcgggaggcttgtatcacactggggcatctgtcatctgtcctggga
aataagtttgaccatggagctgaagccattatgccaactatctttaatttaattccaaac
agtgccaaaatcatggccacatctggtgttgtagctgttaggttaatcattcggcataca
cacatccctcggctaatacctgtcataacaagcaactgtacctccaagtctgttgcagtg
agaaggcgctgttttgaatttttagatttacttttacaagaatggcagacacattcgctg
gaaagacatatatcagtattagccgaaacaatcaagaagggaatacatgacgctgattcg
gaagccaggatagaagccagaaagtgttactggggtttccacagtcacttcagcagagaa
gcggagcacttataccacactttggaatcctcctaccagaaagccttgcagtcccatttg
aagaactctgatagtatcgtgtccctgccgcagtctgatcgctcatcttctagctcccaa
gagagtttgaaccgaccactctctgccaaaagaagccccactggaagtaccacctcgcga
ggttccacagtcagtaccaaatcggcggcaacaactgggtccctccagcggtctagaagt
gacatcgatgtgaacgcggcagccagtgccaaatccaaggtctcttcggttcctggctcg
acgcctttcagctccgctgcggccttgcctcctggctcctacgcatccttagatggtact
gccactaaagcagagggtcggatccgcacaagacggcagagctccgggagtgccaccaac
gttgcctccacgcctgacaatcgtggccgcagccgagcgaaagtggtttcacagtcccag
cgatccagatctgctaatcctgctggtgctggcagccgatcaagttccccagggaaacta
ctgggaagtggttatggtggcctctctgggagctcctcaagaggcccccctgtgacaccc
tcttctgaaaaacgaagcaagattcctcggagtcagggttgcagccgagagacaagtcca
aaccgaataggattagcacggagcagccgtatccctcgacccagcatgagtcaggggtgc
agccgcgataccagccgtgagagcagccgagatacgagccctgctcggggctttcctccg
cttgcctctcgacgtcattccaggtccactagtgctctctccactgctgaatctgtgggg
cagtcagaccggtttggacttggccaggcaggccgaataccaggttccgtgaatgccatg
cgagttttgagcacaagtacagatcttgaagctgcagttgcagatgccttgctgttagga
gactccaggagcaagaagaagcctgtgaggaggagatatgagccatatgggatgtattct
gatgacgatgccaacagtgatgcctcgagtgtttgctctgagcgctcctatggctccagg
aatggtggcattccccattatctgcggcagactgaggacgtagcggaagttctcaaccac
tgtgctagttcaaactggtcagaaaggaaagaagggcttctaggcctgcagaacttactg
aagagccaaagaacgctgagtcgagtagaattgaaaagattatgtgagatcttcacccga
atgtttgctgatcctcatagcaaggttttcagtatgtttttggagactctcgtggatttt
ataataattcataaagatgacttgcaagactggctttttgttcttctgacacaattgctt
aagaaaatgggagcagatttacttgggtctgtacaagcaaaagttcagaaggctctcgat
gtcacaagggattcctttccatttgatcaacaatttaacattttgatgagatttattgtg
gatcaaacacaaactcctaacctcaaggtcaaagtcgcaatcctgaagtacattgagtct
ctggctaggcagatggatcccacagattttgtgaactccagtgagacaagacttgctgtt
tctagaattataacttggacaacagaaccaaagagttcagacgtgagaaaggcagcacaa
attgtgctgatctctctgtttgaattgaatactccggaatttaccatgttacttggtgcc
ttgccaaaaacattccaggatggtgccactaaactccttcataaccatctcaagaattct
agtaacaccagtgtgagttctccgagcaatacaattggccggactccctcccgacacacc
agcagcaggaccagccccctgacctcaccaaccaactgttcccacgggggcctctctcca
agtcggttatggggttggagtgccgatgggttatcgaagcacccacctcccttttctcag
cctaactccattcccaccgctccctcccacaagactctcaggcgctcttactctcccagc
atgctggattatgacacagagaacttgaactctgaagaaatttatagttctttgcgagga
gttacagaagccattgaaaagtttagttttcgaagccaagaggacctgaatgagccaatt
aagcgggatggcaagaaggactgtgacattgtgtcccgggatggtggcgttgcccccctt
ccccccgagggccggggcggcagtgatgtggtagaaggaggcagaacagctctggacaac
aagacctccctcctcaacacccagccaccgcgcgccttcccagggccgcgagcgcgggag
tacaacccctacccctactccgacaccatcaacacctacgacaagacagccctgaaggag
gccgtgtttgacgacgacatggaccagctgagagacgtgcccattgaccattctgacttg
gtggcggacctcctgaaagagctgtccaaccacaacgagcgggtggaagagcggaagggc
gccctgctggagctgctcaagatcacgagggaggacagcctaggcgtctgggaggagcac
ttcaagaccatcctgctcctgctcttggagacactcggagacaaagatcattccatccga
gcgctggcactgagagtattacgggaaattttaaggaaccagccagcaagatttaagaac
tatgctgagctgaccatcatgaagactctggaggcccacaaggactcgcataaagaggtg
gtgcgtgccgccgaggaggccgcgtccacgctggccagctccatccacccggagcagtgc
atcaaagtgctgtgccccatcattcagaccgccgactaccccatcaaccttgccgccatc
aagatgcagaccaaagtcgtcgagaggatcgccaaggactccttgctacagctcctcgct
gacatcatcccgggcttgctgcagggttatgacaacaccgagagcagcgtgcggaaggcc
agcgtgttttgcttagtggcgatttattccgtaatcggagaagagctgaaacctcacctc
gcgcagctcaccgggagcaagatgaagctactgaacttatacataaagagggcccagacc
acgaacagcaacagcagcagctcctcggatgtctccacacacagctaa
DBGET
integrated database retrieval system
