Sorex fumeus (smoky shrew): 130019815
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Entry
130019815 CDS
T10594
Symbol
TAF2
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130019815 (TAF2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfum01002
]
130019815 (TAF2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfum03021
]
130019815 (TAF2)
03036 Chromosome and associated proteins [BR:
sfum03036
]
130019815 (TAF2)
Peptidases and inhibitors [BR:
sfum01002
]
Metallo peptidases
Family M1
130019815 (TAF2)
Transcription machinery [BR:
sfum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130019815 (TAF2)
Coactivators
SAGA/TFTC/STAGA complex
130019815 (TAF2)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
130019815 (TAF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_2
Peptidase_M1_N
Peptidase_M1
SR-25
AP3D1
Motif
Other DBs
NCBI-GeneID:
130019815
NCBI-ProteinID:
XP_055966470
LinkDB
All DBs
Position
Unknown
AA seq
1209 aa
AA seq
DB search
MPPTGIESARMNRKKGDKGFESPRPYKLTHQVVCINNINFQRKSVVGFVELTIFPTVANL
NRIKLNSKQCRIYRVRINDLEAAFIYNDPTLEVCHNESKQRNLNYFSNAYAAAVSAVDPD
AGNGELCIKVPSELWKHVDELKVLKIHINFSLDQPKGGLHFVVPSVEGSMAERGAHVFSC
GYQNSTRFWFPCVDSYSELCTWKLEFTVDAAMVAVSNGDLVETVYTHDMRKKTFHYMLTI
PTAASNISLAIGPFEILVDPYMHEVTHFCLPQLLPLLKHTTSYLHEVFEFYEEILTCRYP
YSCFKTVFIDEAYVEVAAYASMSIFSTNLLHSAMIIDETPLTRRCLAQSLAQQFFGCFIS
RMSWSDEWVLKGISGYIYGLWMKKTFGVNEYRHWIKEELDKIVAYELKTGGVLLHPIFGG
GKEKDNPASHLHFSIKHPHTLSWEYYTMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLA
STASSQKFQSHMWSQMLVSTSGFLKSISNVSGKDIQPLIKQWVDQSGVVKFYGSFAFNRK
RNVLELEIKQDYTSPGTQKYVGPLKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNK
KKKIPLMNGEEVDMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQADFMWQYQLRYERDVV
AQQESILALEKFPTPASRLALTDILEQEQCFYRVRMAACFCLAKIANSMVSTWTGPPAMK
SLFTRMFCCKTCPNIVKTNNFMSFQSYFLQKTMPVAMALLRDVHNLCPKEVLTFILDLIK
YNDNRKNKFSDNYYRAEMIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNME
KLLPSYRHTITVSCLRAIRVLQKNGHVPSDPALFKSYAEYGHFVDIRIAALEAVVDYTKV
DRSYEELQWLLTMIQNDPVPYVRHKILTMLTKNPPFIKNMESPLCNEALVDQLWKLMNSG
TSHDWRLRCGAVDLYFTLFGLSRPSCLPLPELGLVLNLKEKKAVLNPTIIPEAIAGTQEA
VINPSTHAQLVGFQNPFSNSQDEEEIDMDTVHDSQAFISHHLNMLERPSTPGLSKYRPAS
SRPSLLPQHLSGGDSTPTTKPPWNMELARKGTGIHLGVFHLEGKEQSPLEMSLHPTAAAP
LSMFTKETASSKHSDHHHHHHHEHKKKKKKHKHKHKHKHKHDSKEKDKEPFTFSSPASGR
SIRSPSLSD
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgacggggattgagtccgccagaatgaacaggaagaagggagacaagggcttc
gaaagcccccggccgtataaattaacccaccaggtcgtttgcatcaacaacatcaacttc
cagaggaagtctgtggtgggatttgtggaactgacaatatttcctacggttgcaaacctg
aatagaatcaaattgaacagcaaacagtgtagaatctaccgagtaaggatcaatgattta
gaagctgcttttatttacaatgatccgaccttggaggtttgtcacaatgaatcaaaacag
agaaatcttaattatttttccaatgcttatgcagctgcagttagtgctgtggatcctgat
gcaggaaatggagaactttgtattaaggttccttcggagttatggaaacatgtcgatgaa
ttgaaggtcttaaagatacacatcaatttttctttggatcagcccaaaggaggcctacat
tttgtggtacccagtgtagagggaagtatggcggagagaggtgctcatgttttctcttgt
gggtatcaaaattctacaagattttggttcccatgtgttgattcatactctgaattatgc
acttggaaattagaatttacagtagatgctgcaatggtggctgtttccaatggagatttg
gtggagacagtatatacccatgatatgagaaagaagaccttccattacatgctcaccatt
ccaactgcagcgtctaatatctccttggccattggaccttttgaaatacttgtagatcca
tacatgcacgaagttactcatttttgtttaccacaacttcttccattgcttaaacacact
acatcataccttcatgaagtttttgaattctatgaagaaattcttacgtgtcggtatcca
tattcttgtttcaaaaccgtgttcattgatgaagcttatgttgaagtggccgcttatgct
tctatgagtatttttagcacgaatctcttacacagtgccatgattatagatgagactcct
ttgactagaaggtgtttagcgcagtccttagcccagcagttttttggatgtttcatatca
agaatgtcttggtctgatgaatgggttctaaagggaatttctggctatatttatggactc
tggatgaaaaaaacttttggtgttaatgaatatcgccattggattaaagaggaattggac
aaaatagtggcatatgaactaaaaactggtggagttttactacatcctatatttggagga
ggaaaagagaaggataatccagcatcccatttacacttctcaataaagcatccacataca
ctgtcctgggaatactacacgatgtttcagtgtaaagctcaccttgtgatgaggttgatt
gaaaatagaatcagtatggaatttatgctacaggttttcaataaactgctaagtttggcc
agtactgcgtcatctcagaagttccagtcgcatatgtggagtcagatgttggtttccaca
tctggatttttgaaatctatctcaaatgtctctggcaaagacatccagcctttaataaag
caatgggtagaccagagtggagtggtcaagttctatggaagttttgcatttaatagaaaa
cgaaatgtcttggaattagaaataaaacaggattatacatctcctggaactcaaaaatac
gtgggaccacttaaagtgactgtgcaggagttagatggatccttcaatcatacattgcaa
attgaagaaaacagccttaaacatgatataccctgccattccaaaagcagaaggaataaa
aagaaaaaaattccactgatgaacggagaagaagttgacatggatctttctgcaatggat
gctgattctcctttgctgtggataaggatcgaccctgatatgtcggtcctgaggaaggtg
gagttcgagcaagccgacttcatgtggcagtatcagctccgctacgagagggacgttgtc
gcgcagcaggagtccattctggccttggagaagtttcccactcccgcatcccgcctcgcc
ctcactgacatcctggagcaagagcagtgtttctaccgagtgcggatggcagcttgcttc
tgcctcgccaagattgcaaattcaatggtgagcacatggactggaccaccagctatgaag
tcactcttcactagaatgttctgttgtaaaacttgtccaaacattgtgaaaacaaacaac
tttatgagctttcaaagctatttcctacagaagactatgcccgttgcaatggccttattg
agagatgttcacaacctttgtcccaaagaagtcttaacattcattctagacttaatcaag
tacaatgacaacagaaaaaataagttttcagataactattaccgtgcagaaatgattgat
gcccttgccaattctgttacgcctgcagtcagtgtgaataatgaagttcgaacattggat
aacctcaatccggatgtgcggcttatacttgaagaaatcaccagatttttgaatatggaa
aaacttcttccaagttatagacacaccatcactgtcagttgtttgagagctatccgagtg
ctgcagaagaatgggcatgtgccaagtgacccggctctgttcaaatcctatgcggagtac
ggccacttcgtggatataagaattgcagctttggaggctgttgtggactacactaaagtg
gaccggagttatgaagaactacagtggttgcttactatgattcagaatgaccctgtaccc
tatgtaaggcataaaattctgaccatgttgactaagaacccaccgtttattaagaatatg
gagtctcccttatgcaatgaagccctcgttgatcagctttggaaactgatgaattctggc
acctcgcatgactggagattgcgttgcggcgctgtggacctctacttcacacttttcggg
ctcagccgaccatcctgcttacccttgccagagcttgggctggttcttaacctaaaagag
aaaaaagccgtcttgaacccgaccataattccagaggccattgcaggcacccaagaagct
gtgattaaccccagcactcatgcacagctagttggatttcagaaccctttttcaaattct
caagatgaagaggagattgacatggatactgtgcatgatagtcaggcattcatctcccat
catttgaatatgcttgaaagaccatcaactccagggctctctaagtatcggccagctagc
tccaggccttctctactaccccagcacttgtcgggtggtgacagcacaccaaccaccaaa
cctccgtggaatatggagcttgcacggaaaggaacaggaattcatttgggtgtttttcat
cttgaaggtaaagaacagtccccattggagatgagcctccatcccacagcggcagcgccg
ctctccatgttcacgaaggaaacagcatcctccaaacacagtgaccaccaccaccaccat
caccacgaacacaagaagaagaagaaaaaacacaagcataagcacaagcacaagcacaag
cacgacagtaaagagaaagacaaggagcctttcaccttctccagccccgccagcggcagg
tccattcgctctccttctctgtcggactga
DBGET
integrated database retrieval system
