Sorex fumeus (smoky shrew): 130019927
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Entry
130019927 CDS
T10594
Symbol
NLGN1
Name
(RefSeq) neuroligin-1 isoform X1
KO
K07378
neuroligin
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130019927 (NLGN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfum04131
]
130019927 (NLGN1)
Membrane trafficking [BR:
sfum04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
130019927 (NLGN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COesterase
Abhydrolase_3
BD-FAE
Motif
Other DBs
NCBI-GeneID:
130019927
NCBI-ProteinID:
XP_055966512
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MALPRCTWPNYVWRAMMACLVQRGSSASLTLCVMGCLLQAAHVLAQKLDDVDPLVTTNFG
KIRGIKKELNNEILGPVIQFLGVPYAAPPTGEHRFQPPEPPTPWSDIRNATQFAPVCPQN
IIDGRLPEVMLPVWFTNNLDVVSSYVQDQSEDCLYLNIYVPTEDVKRISKECARKPGKKI
CRKGGPLTKKQTDDLGDNDGAEDEDIRDSGGPKPVMVYIHGGSYMEGTGNLYDGSVLASY
GNVIVITVNYRLGVLGFLSTGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGS
GAGGSCVNLLTLSHYSEGNRWSNSTKGLFQRAIAQSGTALSSWAVSFQPAKYARMLATKV
GCNVSDTVELVECLQKKPYKELVDQDIQPARYHIAFGPVIDGDVIPDDPQILMEQGEFLN
YDIMLGVNQGEGLKFVENIVDSDDGISASDFDFAVSNFVDNLYGYPEGKDVLRETIKFMY
TDWADRHNPETRRKTLLALFTDHQWVAPAVATADLHSNFGSPTYFYAFYHHCQTDQVPAW
ADAAHGDEVPYVLGIPMIGPTELFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDT
KFIHTKPNRFEEVAWTRYSQKDQLYLHIGLKPRVKEHYRANKVNLWLELVPHLHNLNDIS
QYTSTTTKVPSTDITFRPTRKNSVPVTSALPTPKQDDPKQQPSPFSVDQRDYSTELSVTI
AVGASLLFLNILAFAALYYKKDKRRHDVHRRCSPQRTTTNDLTHAQEEEIMSLQMKHTDL
DHECESIHPHEVVLRTACPPDYTLAMRRSPDDVPLMTPNTITMIPNTIPGIQPLHTFNTF
TGGQNNTLPHPHSHPHSHSTTRV
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcactgcccaggtgcacatggccaaattatgtttggagagcaatgatggcgtgcttg
gtacaaaggggatcgagtgcctcgttgactctctgtgtgatgggatgtttacttcaggct
gctcatgtgcttgcgcaaaagttggatgatgtcgaccctctggtgactaccaattttggc
aagatcagaggaattaagaaagaactcaataatgaaattttggggcctgtgattcagttt
cttggggttccctatgcagccccaccaacaggggaacaccgtttccagcctccagaacca
ccgactccatggtcagatatcaggaatgccactcagtttgcgcctgtgtgtccccagaat
atcattgatggcagactcccagaagtcatgcttcctgtatggtttactaataacttggat
gtggtgtcatcatacgtgcaagaccagagtgaagattgcctatatttgaacatatatgtc
cccaccgaggatgtaaaaagaatatccaaggaatgtgccagaaaacccggcaagaaaata
tgtagaaaaggaggtccccttacaaagaaacagacagatgatttaggtgataatgacggt
gctgaagatgaagatattcgggacagtgggggtcccaagccagtgatggtgtatatccac
ggtggctcatatatggaaggtactggaaatttgtatgatgggagtgtcttggcaagttat
ggcaatgtgatcgtcatcacagtcaactatcgacttggggtacttggatttttgagcaca
ggagatcaggctgcaaaaggaaactatggactccttgatctcatacaggctttaagatgg
actagtgagaacattggattctttggtggtgaccccttaagaatcactgtttttggatct
ggcgctgggggttcatgtgtcaatctgctgactttatcccattattctgaaggtaaccgt
tggagcaattcaaccaaaggactttttcaacgagcaattgctcaaagtggaacagccttg
tccagttgggctgtcagcttccaacctgcaaaatatgcccggatgctggccacaaaagtg
ggctgcaatgtttcagacacagtagaattagtggaatgtcttcagaagaagccttacaaa
gaacttgttgatcaagacattcaaccagcacgataccacatagcctttggacctgtaatt
gatggtgatgttataccagatgaccctcagattctgatggaacaaggagagtttctcaac
tatgatattatgttaggagttaaccaaggagaaggtttaaaatttgtggaaaatatagtg
gatagtgatgatggtatttcagctagcgattttgactttgcagtttccaatttcgttgat
aatctctatggatatcctgaaggcaaagatgttttgagagaaacgattaaatttatgtat
actgactgggctgaccgtcataaccctgaaacaagaaggaagacattgttggctttgttt
actgaccatcagtgggtggcaccagctgtagcaacagcagatcttcactcaaactttggt
tcacctacatatttctatgccttttaccatcattgccaaacagatcaggttccagcttgg
gctgatgcagctcatggagacgaggttccttacgtactcggaatccccatgattggaccg
acagagttatttccctgcaatttctccaaaaatgatgtgatgctgagtgcagttgtaatg
acatactggacaaattttgccaaaactggtgacccaaatcaaccagttcctcaagacacg
aaattcatacataccaaacccaaccgttttgaagaggtagcatggaccagatattcccag
aaagaccaactttatctccatatcggattaaagccaagagtcaaagaacattacagagcc
aataaggtaaatctctggctagaactggtacctcatctacataatctcaacgacatctct
cagtatacctcgacgacaactaaagtgccatcaactgacatcacgttcagacccacgaga
aaaaattccgtccctgttacatcagccctacccactcctaagcaagatgatcccaaacag
cagccgagtccattctcagtggatcagagggactactcaacagagctcagtgtcaccatt
gccgttggagcctctttgttgtttctgaacatcttggcctttgcagctctgtactacaaa
aaggataagaggagacatgacgtccacaggaggtgcagccctcagcgcacgacaaccaat
gacctgacccatgcacaagaggaagagatcatgtcccttcaaatgaagcacactgatttg
gatcatgaatgtgagtccatccatccacatgaggtggttctccggaccgcctgcccccca
gattatacactagctatgaggaggtcacctgatgatgtccccttaatgacgcccaacacc
attacaatgatccccaatactataccagggattcaacccttacacacattcaacacattt
accggaggacagaacaatactctgcctcacccccactctcacccccattcacattcaaca
accagggtatag
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