Sorex fumeus (smoky shrew): 130019969
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Entry
130019969 CDS
T10594
Symbol
YOD1
Name
(RefSeq) ubiquitin thioesterase OTU1
KO
K13719
ubiquitin thioesterase OTU1 [EC:3.1.2.-]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130019969 (YOD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfum01002
]
130019969 (YOD1)
Peptidases and inhibitors [BR:
sfum01002
]
Cysteine peptidases
Family C88
130019969 (YOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_OTU1_C
OTU
OTU1_UBXL
zf-C2H2_2
Zf-C2H2_ZNF451_5th
Motif
Other DBs
NCBI-GeneID:
130019969
NCBI-ProteinID:
XP_055966543
LinkDB
All DBs
Position
Unknown
AA seq
338 aa
AA seq
DB search
MLGPAKGGHLGAGAAAGFPGGAALPAKGVAPGGGPAGTMWRLRCKAKDGTYVLQGLSSRT
PVRELQGQIAAVTGIAPGGQRILAGYPPECLDLSDGDTALGDLPLQSGDMLIVEEDPARP
RTSASAAAWASPGTPGPTLRRTPVPADNSCLFTSVHYVVEGGVLDPACAPEMRRLIAQTV
ASDPDAYSEAILGKSNREYCDWIRRDDTWGGAIEIAILSKYYQCEICVVDTQTVRIDRFG
EDAGYSKRVLLIYDGIHYDPLQRDFPDPDTPPLTIFSANDDIVLVQALELADEARRKRQF
TDVNRFTLRCMVCQKGLTGQAEAREHAKETGHTSFGEV
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcttggcccggccaagggcggccatcttggggccggcgcggcggccggtttccccggc
ggcgctgcgctccctgccaagggggtcgcgccggggggcggcccggcgggcaccatgtgg
cggctccgctgcaaggccaaggacgggacctacgtcttgcaggggctgtccagccgcacg
ccggtgcgagagctccagggccagatcgccgcggtcaccgggatcgccccgggcggccag
cgcatcctggcgggctacccgcccgagtgcctggacctcagcgacggggacacggcgctg
ggggacctgcccctgcagtcgggggacatgctgatcgtcgaggaggacccggccaggccc
cgcacttccgcgtcggcggcggcgtgggcgagccccgggaccccgggccccacgctgcgc
aggaccccggtccccgccgacaactcgtgcctcttcaccagcgtgcactacgtcgtggag
ggcggcgtcctggaccccgcctgcgcccccgagatgcggcgcctcatcgcgcagacggtg
gccagcgaccccgacgcctacagcgaggccattctgggcaagagcaaccgagagtactgt
gactggatccggagggacgacacctggggaggggccatcgagatcgccatcctgtccaag
tattaccagtgcgagatctgcgtggtggacacgcagaccgtccgcatcgaccgtttcggg
gaggacgcgggctactccaagagggtcctgctcatttacgacggcatccactacgacccg
ctccagcgggacttccccgaccccgacaccccccctctgaccattttctccgccaacgac
gacatcgttctcgtgcaagcgctggagctggccgacgaggcgcggaggaagagacagttc
acggacgtgaaccgcttcaccctgcggtgcatggtgtgtcagaagggattgacgggccaa
gccgaagccagggagcacgccaaggagaccggccacaccagttttggggaagtgtga
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