Sorex fumeus (smoky shrew): 130020359
Help
Entry
130020359 CDS
T10594
Symbol
UBE4B
Name
(RefSeq) ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04120
Ubiquitin mediated proteolysis
sfum04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130020359 (UBE4B)
04120 Ubiquitin mediated proteolysis
130020359 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfum04121
]
130020359 (UBE4B)
Enzymes [BR:
sfum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130020359 (UBE4B)
Ubiquitin system [BR:
sfum04121
]
Ubiquitin ligases (E3)
U-box type E3
130020359 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
130020359
NCBI-ProteinID:
XP_055966948
LinkDB
All DBs
Position
Unknown
AA seq
1173 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPLAASAAGPSQSLGLNVQNM
TPATSPIGAAGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV
DVDSGIENMEVDESDRREKRSLGEKEPPSASEVSEEQALQLVCKIFRVSWKDRDRDVIFL
SSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPITAAARSPD
RSLLLNAGSNPGTSPMLCSVGSLGVGSLSSLGASGGASTWDSYSDHFTIDTCKETDMLNY
LIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQGSLTQPRSPQQPSFLV
PYMLCRNLPYGFIQELVRTTHQDEDVFKQIFIPVLQGLALAAKECSLDSDYFKYPLMALG
ELCETKFGKTHPVCNLVASLPLWLPKALSPGSGRELQRLSYLGAFFSFSVFAEDDAKVVE
KYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETREAALGYMAAVVNANM
KKAQMQADDRLVSTDGFMLNFLWALQQLSTKIKLETVDPTYIFHPRCRIVLPSDETRVNA
TMEDVTEWLAELYGDQPPFSEPKFPTECFFLTLHAHHLSVLPSCRRYIRRLRAIRELNRT
VEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESFLRRCLNFYGL
LIQLLLRVLDPAYPDVTLPLNPDVPKVFAALPEFYVEDVAEFLFFIVQYSPQVLYEPCTQ
DIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMSNPAVQPRTQKFFEMIENHPLSTKLLVPS
LMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINM
LINDTTFLLDESLESLKRIHEVQEEMKNKEQWEQLPRDQQQARQSQLAQDERVSRSYLAL
ATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPK
KLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAE
KVEEIVAQNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRAIILRHLLNSPTDP
FNRQTLTESMLEPVPELKEQIHAWMREKQSSDH
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgcggacgagatccgacggaggcgcctggcacgacttgccggggga
cagacgtcccagccgaccaccccgctcacgtctccccagcgggagaaccccccgggcccg
ccgctggccgcgtccgccgcggggccctcgcagagcctcgggctcaacgtgcagaacatg
accccagctacctcccccatcggcgctgcaggtgtggcccaccggagccagagcagcgaa
ggcgtcagctcgctcagcagctcgccgtccaacagcctcgaaacccagtctcagtcgctg
tcacgctcccagagcatggacatcgacggcgtctcctgcgaaaagagcatgtcccaggtg
gatgtggattcagggatcgagaacatggaggtggacgagagcgatcggcgcgagaagagg
agcctcggggaaaaggagcccccctcggcttcggaggtgtctgaggaacaagccttgcag
ctggtctgtaagatcttccgtgtgtcctggaaggaccgtgaccgggacgtcatcttcctc
tcctccctctctgcgcagtttaagcagaacccaaaagaagtgttctcagactttaaggat
ttgattggccagattttgatggaagtgctaatgatgtccacccagactcgcgacgaaaac
ccgtttgccagtctgacggccacgtcccagcccatcaccgcggccgctcggtccccggac
cgcagtctcctgctcaatgctggctccaacccgggcaccagccccatgctctgcagcgtg
ggctccctcggggtcggctccctgtccagtttgggagcctctggcggggcgagcacttgg
gactcctacagcgaccacttcaccatcgacacctgcaaggagacggacatgctgaactac
ctcatcgagtgtttcgaccgagtggggatagaggagaagaaggcaccaaagatgtgcagc
cagcccgcagtcagccagcttctgagcaacatccgctcccagtgcatctcccacacggcg
ctcgtgctccagggctccctcactcagccaaggtccccgcagcagccttccttcctggtg
ccctacatgctctgccggaatctcccgtacggcttcattcaggagcttgtgagaaccact
caccaggacgaagacgtgttcaagcagatctttatccctgtcttacaaggcctggctctc
gctgccaaagagtgttccctggacagcgactacttcaagtacccgctcatggctctgggg
gagctgtgcgagaccaagtttgggaagactcacccagtgtgcaatctggtcgcttctttg
ccgttgtggttgcctaaagccttaagccctggctccgggcgggagctgcagagactgtct
tacttgggggctttctttagtttctcggtctttgcggaagatgacgctaaagtggtggaa
aaatatttctcagggccagccattaccctggagaatactcgcgtggtcagccagtcactg
cagcattacttggagctgggacggcaagagctcttcaagatcctgcacagcatcctgctg
aatggggagacgcgggaggccgccctcggctacatggcggctgtggtcaacgccaacatg
aagaaggcccagatgcaggccgacgaccggctcgtgtccacggacggcttcatgctcaac
ttcctctgggcgctgcagcagttgagtaccaagatcaagctggagactgtggaccccacg
tacatattccacccgcggtgtcggatcgttctccccagtgacgagacgcgggtgaatgcc
acgatggaggatgtgaccgagtggctggccgagctctatggagaccagcctccgttttct
gagccgaagttccccacggagtgcttcttcctcaccctgcacgcccaccacctctccgtc
ctgcccagctgccgccgctacatccgcaggctccgggccatccgcgagctcaacaggact
gtggaggacctgaagaacaatgagagccagtggaaggactccccgctggccacgaggcac
cgcgagatgctgaaacgctgcaaaactcagctcaagaaactggtacgatgcaaggcctgt
gcggacgcggggctgctcgacgagagcttcctgcgccggtgcctcaacttctacggcctc
ctcatccagctgctgctgcgcgtcctggaccccgcctaccccgatgtgacactgcctctg
aacccagacgtccccaaggtgtttgcagcattgcccgagttttatgtagaagatgttgct
gaatttttattttttattgtacagtactccccccaggtgctctacgagccctgcactcag
gacatcgtcatgttcctcgtggtcatgctgtgcaaccagaactacatccgcaacccgtac
ctggtggccaagctggtcgaggtcatgttcatgagcaacccggccgtgcagccgcggacc
cagaagttcttcgagatgatcgagaaccatcctctgtccaccaagctgctggtcccgtcc
ctcatgaagttctacacagatgtggagcacaccggggccaccagcgagttctacgacaag
ttcactatccgctaccacatcagcaccatcttcaaaagcctgtggcagaacatcgcgcac
cacggcaccttcatggaggagttcaactcggggaagcagtttgtccgctacatcaacatg
ctgatcaacgacacgaccttcttgctggacgagagtctggagtctctgaagcggatccac
gaggtgcaggaggagatgaagaacaaggagcagtgggagcagctgccgcgggaccagcag
caggcccggcagtctcagctggcgcaggacgagcgagtgtcgcgttcctacctggccctg
gccacggagacggtggacatgttccacatcctcaccaagcaggtgcagaagcccttcctc
aggccggaactcggaccccgactggccgcgatgctgaactttaacctccagcagctctgc
ggccccaagtgccgcgacctcaaggttgagaacccagagaaatacggcttcgagcccaag
aagctgctagaccagctgacggacatctacctgcagctggactgcgcgcgctttgccaag
gccatcgccgatgaccagcggtcctacagcaaggagctgtttgaggaggtcatctccaag
atgcgcaaggccggcatcaagtccaccatcgccatcgagaagttcaagctgctggccgag
aaggtggaggagatcgtggcccagaacgcgcgcgccgagatcgactacagcgacgcgccc
gacgagttccgagacccgctgatggacaccctgatgacagaccccgtgcggctgccctcg
ggcaccatcatggaccgtgccatcatcctgcggcatctgctcaactcccccacggacccc
ttcaaccggcagacgctgaccgagagcatgctggagcccgtgccggagctgaaggagcag
atccacgcctggatgcgagagaagcagagcagtgaccactag
DBGET
integrated database retrieval system
