Sorex fumeus (smoky shrew): 130020432
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Entry
130020432 CDS
T10594
Name
(RefSeq) LOW QUALITY PROTEIN: exosome component 10-like
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
sfum03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
130020432
BRITE hierarchy
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Paralog
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Other DBs
NCBI-GeneID:
130020432
NCBI-ProteinID:
XP_055967019
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Position
Unknown
AA seq
920 aa
AA seq
DB search
MAPPSSQAPRAXSAESVPQPEEEMVLPGFPDIDSFMKFALRSVEAVIKASGSLPKSGPEY
DFYQSFPGFQALCETQGDRTLEGMSRMMQYYVCQSNIKDCRKVTDLEDNFDLLVDANDAI
LDGVGILLDEASGMKKHQQPVLPIGSQARQMIVSSWNRKVGESGKKTKSEPFRLLHVKNI
IRPQLKFREKIDNSNTPFVPKIFIKPNALKPLPRGLSKESREHTKNQSEDQDVPPALVHF
LHQQRTQQVEQDVFAHPYQYELDHFTPPEWALQKPQPQAYKPLEDTACHLVTLLDQLVQL
NATLLACWEFAVDLEHHFYRSFLGLTCLMQISTRTEDFIIDTLELRSDMHLLNESFTDPA
IVKVFHGANSDIEWLQKDFGLYVVNMFDTQQAARLLRLGRHSLDHLLKRYCNVQANKQYQ
LADWRMRPLPEEMLHYAREDTHYLLYIYDCMRLELWAAASEQPSKARVVWQRSRDICLRK
FAKPLFTDESYLKLYEKLKTPLNAQQLTAFRLLFAWRDNLARREDESCCYVLPNRMMLKI
SEELPEEPQGIIACCTPVPPLVWQQLHELHLLIQKARGTPLCQSEVATGLRRRALLPHPE
RPENVLVGPHHRSNAWSSDCPAVPTNEPVPGQMQAGLFPAQHEEKTLGTSRFVATAADTL
FNEASAEQKDKTQKKVQPVMQYLENPFGMLPQALQHHAHISQAAKADPSSSINEISERWE
LASQAQGQKDSKDTARKRAAQATAAQDEAKEGSQTPPQPALSLSQQIALENAAKKRERTS
DPRAPEQKKEEKWSKLAEKPKDPREAREKASTSFDYCKPNVQAFAGNSKSQAASQFDPGK
QIVAGKKCFAAKELKQTAGNKSMSFVPRELNRGFRCNWPRRPCPPAFRVLPGTGRQRPWD
GFVYHPNFNTVRNNCYWEKE
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggcacctccgagttcccaggccccaagggctncatcagctgagagcgttcctcagcct
gaggaggagatggtgctgcctggcttcccggacatcgacagcttcatgaagtttgctcta
aggtcagtggaggcagtcattaaggcatctgggagcctgccaaagtctggcccagaatat
gatttttaccaaagttttccaggcttccaagcattgtgtgagactcaaggagacagaaca
cttgagggcatgagcagaatgatgcagtactacgtgtgtcagagcaacatcaaggattgc
aggaaagtgacggacttggaagacaattttgatttattggttgacgccaatgatgctatt
ctggatggagtgggcattttactggatgaagcttcaggcatgaagaagcatcagcagccc
gtcctccccataggatcacaagcccgccaaatgatcgtgtccagctggaaccggaaagta
ggagaatctggcaaaaaaacaaaatctgaacccttccggctgcttcatgtgaagaacatc
atccgaccgcagcttaaattccgagagaagatcgacaattccaacaccccatttgttccg
aagatcttcatcaagcccaacgccctgaaacctctccctcgggggctgtctaaggagagt
cgggagcacaccaagaaccaatcagaggaccaggatgtgccaccggccctggtccacttc
ctccaccagcagcggacccagcaggtagagcaggacgtgttcgcacacccctatcagtac
gaactggatcactttacgcccccagagtgggcgcttcagaaaccgcagccccaagcctac
aagcccctggaggacactgcctgccacttggtgaccttgctggaccaactcgtgcaactc
aacgcgacgctcctggcctgttgggaatttgcggtggacttggagcatcacttttaccgc
agcttcctgggcctgacctgcctgatgcagatttccacgcgcaccgaagacttcatcatc
gacacgctggagctgcgcagcgacatgcacctcctcaacgagagcttcacagaccctgcc
atcgtgaaggtcttccacggcgctaactccgacatagaatggctgcagaaggacttcggg
ctgtacgtggtgaacatgttcgacacgcagcaggcagcgcgccttcttcggctgggccgg
cactccctggaccacttgctgaaacgctactgcaacgtgcaggcgaacaagcagtatcag
ctggccgactggaggatgcgccctttgccggaggaaatgctccactatgcccgcgaggac
acccactacctgctctacatctacgactgcatgaggctggagctgtgggctgctgccagc
gagcagccctcgaaggcccgggtggtgtggcagcgcagtagggacatctgcctccggaag
tttgcgaaacccctcttcacggatgagtcctacctgaagctgtatgagaagctgaagacg
cctcttaatgcacagcagctgacagccttccggctgctgttcgcctggagggataacctg
gcaaggagggaggatgagagttgctgctatgtcttgcccaaccgcatgatgctgaagatc
tcagaagagctgcccgaggaaccccagggcatcattgcttgctgcacccccgtcccgcct
ctggtatggcaacaacttcatgagctgcatcttctcatccagaaggcgcgaggaacccct
ctgtgccagtcggaagttgccaccggactgaggaggagagcactgctgccccatcccgag
aggcctgaaaatgttctcgttggacctcaccaccgctccaacgcttggtcgagtgactgc
cctgccgtccccaccaatgagcccgtcccgggccagatgcaggccggactcttcccagcc
cagcacgaagagaagaccctgggcaccagccgcttcgttgccacggccgcggacaccttg
tttaatgaggcaagtgcagagcaaaaggacaaaacccagaagaaagtccagccagtgatg
cagtacttggagaacccattcgggatgcttccgcaggcgctccaacaccatgcccacatt
tcccaggcagccaaggccgacccttcctccagcatcaatgaaatcagcgagcgctgggag
ctggccagccaggcgcagggacagaaagactctaaggacaccgccaggaagagggcagcc
caggcgacagccgcccaagacgaggccaaggaagggtcgcagacccctccccagccggct
ctgtcgctcagccagcagatcgccctggaaaacgctgccaagaagagagagcgaacaagt
gaccccagagcccctgaacagaaaaaagaggagaaatggtccaaactggctgagaagccc
aaggaccccagagaggcgcgggagaaagcttctacttcctttgactactgcaagccaaac
gtccaggcgtttgctggaaacagcaagtcccaagcggcctcccagtttgaccccggtaag
cagatcgtggctggcaagaaatgcttcgcagccaaagaactcaaacagaccgcgggaaac
aaaagcatgtccttcgttccccgtgagttgaacagagggttcagatgcaactggcccagg
agaccgtgtccgccagccttccgggttcttcccgggactgggaggcaacggccttgggat
ggttttgtataccatcccaattttaacactgttagaaataattgttactgggaaaaagaa
taa
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