KEGG   Sorex fumeus (smoky shrew): 130020447
Entry
130020447         CDS       T10594                                 
Name
(RefSeq) exosome component 10-like
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum03018  RNA degradation
Brite
Messenger RNA biogenesis [BR:sfum03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     130020447
SSDB
Other DBs
NCBI-GeneID: 130020447
NCBI-ProteinID: XP_055967035
LinkDB
Position
Unknown
AA seq 601 aa
MAPPSSPGPKGSSAASVPQPEEEMVLPGFPDIDSFMKFALRSVEAVIKASGSLPKSGPEY
DFYQSFPGFQALCETQGDRILEGMSRMMQYYVCQSNIKDCRKVTDLEDNFDLLVDANDAI
LDGVDILLDEASGMKKHQQPVLPIGSQARQMIVSSWNRKVGESGKKTKSEPFRLLHVKNI
IRPQLKFREKIDNSNTPFVPKIFIKPNALKPLPRALSKESREHTKNQSEDPDVPPALVHF
LHQQRTQQVEQDVFAHPYQYELDHFTPPEWALQKPQPQAYKPLEDTACHLVTSLDQLVQL
NATLLACWEFAVDLEHHFYRSFLGLTCLMQISTRTEDFIIDTLELRSDMHLLNESFTDPA
IVKVFHGANSDIEWLQKDFGLYVVNMFDMQQAARLLRLGQHSLDHLLKRYCNVQVNKQYQ
LADWRVRPLPEEMLHYAREDTHYLLYIYDCMRLELWAAASEQPSKARVVWQRSRDIRLRK
FAKPLFTDESYLKLYEKLKTPLNTQQLTAFRLLFAWRDHLARREDESCCYVLPNRMMLKI
SEELPEEPQGIIACCTPVQPLVWQQLNELHLLIQKARGTPLCQSEVATGLRRIQFDTRPV
F
NT seq 1806 nt   +upstreamnt  +downstreamnt
atggcacctccgagttccccaggccccaagggctcatcagctgcaagcgttcctcagcct
gaggaggagatggtgctgcctggcttcccggacatcgacagcttcatgaagtttgctcta
aggtcagtggaggcagtcattaaggcatctgggagcctgccaaagtctggcccagaatat
gatttttaccaaagttttcctggcttccaagcattgtgtgagactcaaggagacagaata
cttgagggcatgagcagaatgatgcagtactacgtgtgtcagagcaacatcaaggattgc
aggaaagtgacggacttggaagacaattttgatttattggttgacgccaatgatgctatt
ctggatggagtggacattttactggatgaagcttcaggcatgaagaagcatcagcagcct
gtcctccccataggatcacaagcccgccaaatgatcgtgtccagctggaaccggaaagta
ggagaatctggcaaaaaaacaaaatctgaacccttccggctgcttcacgtgaagaacatc
atccgaccgcagcttaaattccgagagaagatcgacaattccaacaccccatttgttccg
aagatcttcatcaagcccaacgccctgaaacctctccctcgggcgctgtctaaggagagt
cgggagcacaccaagaaccaatcagaggacccggatgtgccaccggccctggtccacttc
ctccaccagcagcggacacagcaggtagagcaggacgtgttcgcacacccctatcagtac
gaactggatcactttacgcccccagagtgggcgcttcagaaaccgcagccccaagcctac
aagcccctggaggacactgcctgccacttggtgacctcgctggaccaactcgtgcaactc
aacgcgacgctcctggcctgttgggaatttgcggtggacttggagcatcacttttaccgc
agcttcctgggcctgacctgcctgatgcagatttccacgcgcaccgaagacttcatcatc
gacacgctggagctgcgcagcgacatgcacctcctcaacgagagcttcacagaccctgcc
atcgtgaaggtcttccacggcgctaactccgacatagaatggctgcagaaggacttcggg
ctgtacgtggtgaacatgttcgacatgcagcaggcagcgcgccttcttcggctgggccag
cactccctggaccacttgctgaaacgctactgcaacgtgcaggtgaacaagcagtatcag
ctggccgactggagggtgcgccctttgccggaggaaatgctccactatgcccgcgaggac
acccactacctgctctacatctacgactgcatgaggctggagctgtgggctgctgccagc
gagcagccctcgaaggcccgggtggtgtggcagcgcagtagggacatccgcctccggaag
ttcgccaaacccctcttcacggatgagtcctacctgaagctgtatgagaagctgaagacg
cctcttaatacgcagcagctgacagccttccggctgctgttcgcctggagggatcacctg
gcaaggagggaggatgagagttgctgctatgtcttgcccaaccgcatgatgctgaagatc
tcagaagagctgcccgaggagccccagggcatcattgcctgctgcacccccgtccagcct
ctggtatggcaacaacttaacgagctgcaccttctcatccagaaggcgcgaggaacccct
ctgtgccagtcggaagttgccaccggactgaggaggatacagtttgatacacggcccgtt
ttttga

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