KEGG   Sorex fumeus (smoky shrew): 130020490
Entry
130020490         CDS       T10594                                 
Name
(RefSeq) tripartite motif-containing protein 75-like
  KO
K12037  tripartite motif-containing protein 75
Organism
sfum  Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sfum04121]
    130020490
Ubiquitin system [BR:sfum04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    130020490
SSDB
Motif
Pfam: zf-C3HC4_4 SPRY zf-RING_UBOX zf-C3HC4 PRY zf-B_box zf-C3HC4_2 zf-C3HC4_3 zf-RING_2 RING_XB3-XBAT31 zf-RING_5 TRAF3_RING Apolipoprotein Sina_RING Baculo_IE-1 zf-RING_6 L_PA-C-like DUF3435 zf-Nse zf-rbx1 GAS Prok-RING_4
Other DBs
NCBI-GeneID: 130020490
NCBI-ProteinID: XP_055967064
LinkDB
Position
Unknown
AA seq 473 aa
MEEVSAALAKRQPDLICRICLEYINDPVTIDCGHSFCDSCIRMSWKDLKDTFPCPVCRQS
RQEMRVSANAQLGRLVDLAMLLHSSGSSEMAPAEEGSCEEHRQGVSLFCEDDQELVCPLC
AQGPAHQGHHIRSVAEAAAHHRQRLSDCIESLKKQLAEVQKRDVAQDRNLLQLRADGEKH
RSQLASEFEQLTQFVEREHEAALCRLTEEDKRLQQQLRDNLEAYSDHIWELEDLRRDVAE
RSVMSEEMVLRGVRGLQQRCAGLQLPAVQPLRFRPVAYSLPPLHSALNSIIRRFRESISL
DPDTAHPSLRVSQDLQSVTCVRKRSKGDGGTKSCDDTDQLVVLGREGFASGRHYWEVQVG
AKPEWAVGVCSVAPSAQTSRPLAAPKRCWTLQLQDGDYLEVSGGAVPLALRDQPAAIGIY
LDWELGQLSFYNAADRSHLHLFIESFAEELKPYFRVGPDCAPLSVGSGRAEQG
NT seq 1422 nt   +upstreamnt  +downstreamnt
atggaggaggtgtcagcagccctggccaaaaggcagccagacctcatctgtcgcatctgc
ctggaatacatcaatgaccccgtcaccatcgactgcggccacagcttctgtgactcctgc
atccgcatgtcatggaaggacctgaaggacacattcccttgtcccgtgtgccggcagtcc
cgccaggagatgcgcgtcagtgccaacgcccagctgggcaggctggtggacctggcgatg
ctactgcacagctctgggagcagcgagatggcaccggcagaggagggcagttgtgaggag
cacaggcagggagtgagcctcttctgcgaggatgaccaggagctggtgtgtcctctgtgt
gcccagggccctgcccaccagggccaccacatcaggtccgtggctgaggcagcggctcat
cacagacagaggctcagcgactgcatcgagtccctgaagaagcagctggcagaggtgcag
aagcgagatgtcgcccaagacagaaacctcctgcagctgagagcggacggggaaaagcac
aggagtcagctggcctcggaatttgagcagctcacccagtttgtggagcgtgagcacgag
gccgcactctgcaggctgacagaagaggacaaacgcctgcagcagcagctcagggacaac
ctggaggcctactcggaccacatctgggagcttgaagacctcagacgggatgtggcagag
cggagcgtgatgtccgaggagatggtgctgaggggcgtgaggggcctgcagcagcgctgt
gcgggcctgcagctcccggccgtgcagcccctgcgctttaggcccgtggcctacagcctc
cctcctctgcactcggcgctcaacagcatcatccggagattccgagagagcatcagcctg
gaccccgacacggcccaccccagcctgcgagtgtcccaggacctccagtcggtgacctgc
gtgaggaagaggtccaaaggggatgggggcaccaaatcctgtgatgacaccgaccagctg
gtggtcctgggccgggagggcttcgcttctggccgccactactgggaggtgcaggtgggc
gccaagcccgagtgggccgtgggcgtgtgcagcgtcgcgccttcggcccagacctcgcgt
cccctggcggctcccaagagatgctggacgctgcagctgcaggatggcgactacctggaa
gtgagtgggggggccgtgcctctggctctcagggaccaacccgcggccatcggcatttac
ctggattgggagctgggccagctttccttctacaacgccgccgacaggtctcacctgcac
ttgttcatcgagtcctttgctgaagagctcaagccgtacttccgcgtggggccggactgc
gcccctctctctgtgggctcggggagggcagagcaggggtga

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