Sorex fumeus (smoky shrew): 130020613
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Entry
130020613 CDS
T10594
Symbol
HERC3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130020613 (HERC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfum04121
]
130020613 (HERC3)
Enzymes [BR:
sfum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
130020613 (HERC3)
Ubiquitin system [BR:
sfum04121
]
Ubiquitin ligases (E3)
HECT type E3
130020613 (HERC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
130020613
NCBI-ProteinID:
XP_055967181
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MLCWGYWSLGQPGIGSDLQGIVAEPQVCGFVSDRSVKEVACGGNHSVFLLEDGGVYTCGL
NTKGQLGHEREGNKPERIGALADERIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLVT
VEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGREFPSQAS
PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDDEDRESPCHVKLLR
TQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIA
CGRQHTLAFVPSSGLIYAFGCGARGQLGTGRTCNVQCPSPVKGHWAAHSGQLSASADRFK
YHIVKQIFSGGDQTFVLCSKYENACPAVDFRTLNQAHYTSLINDETIAVWRQKLAEHGSS
NTINGVVQILSSAACWNGSFLEKKIDEHFKTSPRTPGIDLNSTRILFEKLMSSQHSMILE
QILNSFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAILRLDANP
SKVLDNWWSQACPEYFMKLVNLYRGAVVYLLRGRKTFLIPVLFNNYITAALKLLEKLYKV
NLKVKHVEYDTFYIPEISSLVDIQEDYLMWFLHQAGMKARPSIIQDAVTLCSYPFIFDAQ
AKTKMLQSDAELQMQVAVNGANLQNVFMLLTLEPLLARSPFLVLHVRRDNLVGDALRELS
IHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDT
CFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVPPGLEDLKELSPTEGRSLQE
LLDYPGEDIEDTFCLTFTICRESYGVAEQKKLIPGGDRVTVCKENRQEFVDAYVNYVFQI
SVHEWYSAFSSGFLKVCGGKVLELFQPSELRAMMVGNCNYDWKELEATAVYKGDYSAAHP
TVKLFWETFHEFPLEKKKKFLLFLTGSDRIPIYGMASLQIVIQPTASGEDYLPVAHTCYN
LLDLPKYSSKETLCARLTQALDNYEGFSLA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgctatgttggggatactggtctctgggccagcccgggatcggcagcgacctgcagggc
atcgtggccgagccccaggtgtgcggcttcgtctcggaccggagcgtgaaggaggtggcg
tgcggggggaaccactccgtgttcctgctggaggacgggggcgtctacacctgcggcctc
aacaccaagggccagctgggccacgagcgggaaggaaacaagcccgagcgaatcggagcc
ttggcggatgagcgcatcgtgcatgtggcctgtggcgagtcccacagtctcgccctcagt
gaccgggggcagctcttctcctggggtgcgggcagtgacggccagctcgggctcgtgacc
gttgaggactcagtggcggtgcccaggttaatacagaagctgaaccagcagacgatcttg
caagtctcctgtggcaactggcattgcttggctcttgcggctgatggtcagttcttcacg
tggggcaggaacagtcatgggcagctgggcctggggcgggagttcccgtcgcaggccagt
ccgcagcgcgtgcggtccctggagggcatccccctggcccaggtggcggcgggtggtgcg
cacagcttcgccctctccctctccggcgccgtcttcggctggggcatgaacaacgccggg
cagctgggcctcagcgacgatgaagatcgagagtctccttgccatgtgaagctcttacga
acgcaaaaagttgtttatattagctgtggagaagaacacacagctgtcctcacgaaaagc
gggggcgtgttcaccttcggagccggttcctgcgggcagctgggccacgactccatgaac
gacgaggtcaacccgaggagggtgctagagctgatgggcagcgaggtcacccagatcgct
tgcggcaggcagcacaccctcgccttcgtgccttcttccggacttatctacgccttcggc
tgcggagccagaggtcagctggggactggacgcacgtgtaatgtgcagtgtccgtccccg
gtgaaggggcactgggccgcccacagcgggcagctctcggccagcgcagatcgctttaag
taccatattgtgaagcagatcttctctgggggagaccagactttcgtgctttgctccaaa
tacgagaatgcctgtccggccgtggacttcaggaccctgaaccaggctcactacaccagt
ctcatcaacgacgagaccatcgccgtctggaggcagaagctggctgagcacggcagctcc
aacaccatcaatggtgtagttcagatattatcctctgcagcctgctggaatggaagtttc
ctggaaaaaaaaattgatgagcattttaaaaccagccccagaacccccgggattgacctg
aactcaacgagaatattgtttgagaagttaatgagctcccagcactccatgattctagaa
cagatcctcaacagctttgagagctgcctgattcctcagttgtccagttccccgccggac
gtcgaggccatgagaatctacttgatactccccgagtttcccttgctccaggactccaag
tactacatcacactgaccatccccctggccatggccatcctgcggctagacgcgaacccc
agcaaagtcttggataactggtggtcgcaggcgtgcccagagtatttcatgaagctggtg
aacctctatagaggagcagtcgtttacctgctgcggggaagaaagacgttcctaattcct
gtcctgtttaacaattacatcacagctgctctgaagctcttggagaagttatacaaggtc
aatctcaaagttaagcacgtggaatatgacacattttacattcctgagatctccagtctc
gtggacattcaagaagactacctcatgtggttcctgcatcaggctggcatgaaggccagg
ccgtctataatacaggatgccgtgaccctctgttcctaccccttcatcttcgacgcccag
gccaagacgaagatgctgcagagtgacgcggagctccagatgcaggtggcagtgaatggg
gccaacctgcagaatgtcttcatgctcctcacgctggagcctctgctggccagaagccca
ttcctggtcctccatgtccgccgggacaacctcgtgggcgacgccctgcgggagctgagc
atccactcagacatcgacctgaagaagcccctcaaggtaatctttgacggcgaggaagcg
gtggacgccgggggggtcaccaaggagttcttcctcctgctgctgaaggagctgctgaac
cccatctatggcatgttcacctactaccaggactcgaatctcttgtggttttcagatacg
tgttttgtagagcacaactggttccacctgatcggcatcacctgcgggctggccatctac
aactccaccgtggtggacctgcacttccccctggccctctacaagaagctgctcaacgtc
ccgcctggcctggaagacttgaaggagctgtcccccaccgaggggaggagtcttcaagaa
cttctagattaccccggggaggacatcgaggacaccttctgcctcaccttcacgatctgc
cgagagagctacggcgtggccgagcagaagaagctgatccctgggggagaccgggtgacc
gtgtgcaaagagaacaggcaggaatttgtggatgcctacgtgaactacgtcttccagatc
tcagtgcacgagtggtactcggctttctccagcggcttcctgaaggtgtgcggtggcaaa
gtgctcgagctcttccagccgtcggaactgcgggccatgatggtggggaactgcaactat
gactggaaggagctggaggcgacggctgtctataagggggattactcagccgcacatccc
actgtgaaactcttttgggaaacgtttcacgagtttccattggaaaaaaagaagaagttt
ctcttgttcctgactggcagtgaccgcatccccatctacggcatggccagcttgcaaatc
gtcatccagcccacggccagtggagaggactacctgcccgtggcccacacttgctacaac
ctgctggacctgcccaagtacagcagcaaagagacgctgtgcgcgcggctgacccaggcg
ctggacaactacgagggcttcagcctggcctga
DBGET
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