Sorex fumeus (smoky shrew): 130020678
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Entry
130020678 CDS
T10594
Symbol
PRDM8
Name
(RefSeq) PR domain zinc finger protein 8
KO
K20797
PR domain zinc finger protein 8 [EC:2.1.1.-]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130020678 (PRDM8)
03036 Chromosome and associated proteins [BR:
sfum03036
]
130020678 (PRDM8)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
130020678 (PRDM8)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
130020678 (PRDM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2_4
zf-C2H2
SET
Zf-C2H2_ZNF451_C
DUF1835
zf-C2H2_2
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
130020678
NCBI-ProteinID:
XP_055967281
LinkDB
All DBs
Position
Unknown
AA seq
710 aa
AA seq
DB search
MEDSGIQRGLWDGDAKAVQQCLTDIFTSVYTTCDIPENAIFGPCVLSHTSLYDSIAFIAL
KSTDKRTVPYIFRVDTSAANGSSEGLMWLRLVQSARDKEEQNLEAYIKNGQLFYRSLRRI
AKDEELLVWYGKELTELLLLCPSRSHSKMNAGSSPYTCLECSQRFQFEFPYAAHLRFRCP
KRLHSADLSPPDEQGGGGGGGVGVGTKDHGGGGGVGVGAKDPPPPRQDASLGPGPKFACS
KAGPIHHYPAPSPEGTNPPPVGGGGGGGGAKPSTDFHNLARELENSGGGRSCSPGRGLGG
GGGGGGGGGHQEAELSPDGHAAGGAKGKRKFPDEAADGGGGGAGLAAGRSRFSERPLPVP
KEDLVCTPQQQYRAPGSYFGLDDGGRLFAPPSPETGEAKRSAFVEVKKAAAAARAAGLQE
EAAAAAADGGGADEQDAGGGGGGGSSTPVAASPRPGAPLAGRLEGGSPARGSAFTSVPQL
GGAAGAAGAPGGAAGTGPGAAAAAAAASDERKSAFSQPARSFAQLPPLVLGQKLGALEPC
HPPDGVGPARLYPATAAAAAAAAAAAAAAGDPLAVKLQGAAELGAGCGGLPKQSPFLYAT
AFWPKSSAAAAAAAAAAAAGPLQLQLPSALTLLPPSFTSLCLPAQNWCAKCNASFRMTSD
LVYHMRSHHKKEYAMEPLVKRRREEKLKCPICNESFRERHHLSRHMTSHN
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggaggattcgggcatccagcgaggcctctgggatggcgatgccaaggccgtgcagcag
tgtctgacagatatttttaccagcgtctacaccacctgtgacatccccgagaatgccatc
tttgggccctgcgtcctaagccacacatccctgtatgacagcatagcattcatagcgctc
aagtccacggacaagagaacagtcccttatatcttccgggtagacacctctgcggccaac
ggttcctcagaaggtctcatgtggctgcggctggtccagtccgcccgagataaagaggag
cagaaccttgaagcctatatcaaaaacggacagctgttttaccgctctctccgcaggatt
gccaaagacgaggagttactagtttggtacgggaaagaactgactgagttactcttgctc
tgcccctctcggtcccacagcaagatgaatgcggggtcgtccccttacacctgcctggaa
tgcagccaacgcttccagttcgagttcccctacgcggcgcatctgcgcttccgttgcccc
aagaggctgcacagcgccgatctgagccccccggacgagcaaggcggcggcggcggcggc
ggcgtgggcgtgggcaccaaggaccacgggggcggcggcggagtcggcgttggtgccaaa
gaccctccgccaccgcgacaagacgcgtccctgggcccgggccccaagttcgcctgcagc
aaagccggccccatccaccactacccggcgccctcccccgagggtaccaacccgcctccc
gtcggcggcggcggcggtggcggcggcgctaaaccctccacggatttccacaatctggcg
cgggagctggagaactccgggggcggccgcagctgctccccgggccggggcctcggcggc
ggcggcggcggcggcggcggcggcggccaccaggaggcggagctgagccccgacggccac
gccgcgggcggtgccaaggggaagaggaaattcccggacgaggcggccgacggcggcggc
gggggcgcggggctggcggcgggccggagccgcttctccgagcggccgctgcccgtgccc
aaggaggacctggtgtgcacgccgcagcagcagtaccgcgcgccgggcagctacttcggc
ctggacgacggcggccgcctgttcgcgccgcccagccccgagacgggcgaggccaagcgc
agcgccttcgtggaggtgaagaaggcggcggcggcggcgcgcgcggcgggcttgcaggag
gaggcggcggcggcggcggccgacggcgggggcgccgacgagcaggatgctggcggcggg
ggcgggggcggctcgtccacgccggtggcagcgtcgccgcgacccggggccccgctggcc
ggccggctggagggcggcagcccggcgcggggcagcgccttcacgtcggtgccgcagctg
ggcggcgcggcgggcgcggcgggcgcccccgggggcgcggcgggcaccgggcccggcgcg
gcggcggcggcggcggcggcgtcggacgagcgcaaaagcgccttctcgcagcccgcgcgc
tccttcgcgcagctgccgccgctggtgctgggccagaagctgggcgcgctggagccctgc
cacccccccgacggcgtgggacccgccagactctaccccgccaccgccgccgccgccgcg
gccgccgcggccgcggccgccgcggcgggcgacccgctggccgtgaagctgcagggcgcg
gccgagctgggcgcgggctgcggggggctgcccaagcagagccccttcctctacgccacc
gccttctggcccaagagctcggcggccgcggcggcggcggcggccgcggcggccgcggga
cccctgcagctgcagctgccgtcggcgctcaccctgctgccgccctccttcacgtcgctg
tgtctgcccgcgcagaactggtgcgccaagtgcaacgcctcgttccgcatgacgtccgac
ctggtgtaccacatgcgctcgcaccacaaaaaggagtatgccatggagcccctggtgaag
cggcggcgggaggagaaactcaagtgccccatctgcaacgagtccttcagggagcgccac
cacctgtcccggcacatgacctcgcataactga
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